Gene Information

Name : Pmen_2307 (Pmen_2307)
Accession : YP_001187797.1
Strain : Pseudomonas mendocina ymp
Genome accession: NC_009439
Putative virulence/resistance : Virulence
Product : UDP-glucose pyrophosphorylase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : 2.7.7.9
Position : 2543641 - 2544504 bp
Length : 864 bp
Strand : -
Note : TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase

DNA sequence : 
ATGATCACGAAATGCTTATTCCCCGCTGCGGGTTACGGTACCCGCTTTCTTCCCGCTACCAAGTCGATGCCCAAGGAAAT
GCTGCCGGTAGTCGACACGCCGCTGATCCAGTACGGCGTCGAGGAAGCGCTCGAGGCCGGCCTTACCCAGATCGCCATCG
TCACCGGGCGCGGCAAGCGCTCGCTGGAAGACCACTTCGACATCAGCTACGAACTCGAGCACGAGATTTCCAATACCAGC
AAGGAAAAATCCCTCATCGGCATTCGCCATCTGATCGAAACCTGCACCTTTTCCTATACCCGCCAGGTGGAGATGAAGGG
CCTCGGCCATGCCATCCTCACCGGTCGCCCGCTGATCGGCGACGAGGCCTTTGCCGTGGTGCTGGCCGACGACCTGTGCC
TGAACGTCGACGGCGACGGCGTGCTGAGCCAGATGGTCAAGCTCTACGAGCAGTTCCGCTGCTCCATCGTGGCGATCGAG
GAAGTGCCCATGGACGAGGTGTCGCGCTACGGCGTGATCGCCGGCGAAGCGCTGCGCGAGGACATCTTTCGCGTCGAGCG
CATGGTGGAAAAACCGAACCCCGAGGACGCACCGTCCAACCTGGCGATCATCGGTCGCTACATTCTCACCCCCGACATCT
TCGAACTGATCGAGCAGACCGAGCCCGGCAAGAGCGGCGAGATCCAGATCACCGACGCGCTGATGAAGCAGGCCCAGCAG
GGGTGCGTGCTGGCCTACAAGTTCAAGGGCCAACGCTTCGACTGCGGTTCGGCCGAGGGCTACGTGCAGGCCACCAACTT
CTGCTTCGAGAATCGCCACAAGACTCACCCCGTGATCGCCAGCCCACGCCTGCAGGCGGTGTAG

Protein sequence : 
MITKCLFPAAGYGTRFLPATKSMPKEMLPVVDTPLIQYGVEEALEAGLTQIAIVTGRGKRSLEDHFDISYELEHEISNTS
KEKSLIGIRHLIETCTFSYTRQVEMKGLGHAILTGRPLIGDEAFAVVLADDLCLNVDGDGVLSQMVKLYEQFRCSIVAIE
EVPMDEVSRYGVIAGEALREDIFRVERMVEKPNPEDAPSNLAIIGRYILTPDIFELIEQTEPGKSGEIQITDALMKQAQQ
GCVLAYKFKGQRFDCGSAEGYVQATNFCFENRHKTHPVIASPRLQAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 3e-57 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmen_2307 YP_001187797.1 UDP-glucose pyrophosphorylase VFG0964 Protein 2e-55 43