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Name : gabD (Pmen_0231) Accession : YP_001185737.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 237746 - 239197 bp Length : 1452 bp Strand : + Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent DNA sequence : ATGCAACTGAAAGACCCCCAGCTGCTGCGCCAACAGGCCTATATCCATGGCCAGTGGCTGGACGCCGACAGCGGTCAGAC CATCGCCGTGAACAACCCGGCCACCGGTGAGATCATCGGTCATGTGCCGAAGATGGGCCGTGCGGAGACGCGCCGTGCCA TCGAGGCCGCCGAGAAGGCGCTGCCGGCCTGGCGTGCGCTGACTGCCAAGGAGCGCGCCAACAAGCTGCGCCGCTGGTTC GAGTTGCTGATGGAGAACCAGGATGACCTCGGTCGCCTGATGACCCTGGAGCAGGGCAAGCCGCTGGCCGAAGCCAAGGG CGAGATCGCCTATGCCGCCTCCTTTATCGAGTGGTTCGCCGAAGAAGCCAAGCGCGTCTACGGTGACGTGATTCCCGGCC ACCAGCCGGACAAGCGCCTGATCGTGATCAAGCAGCCGATCGGCGTCACCGCCGCCATTACCCCGTGGAACTTCCCCGCT GCGATGATCACCCGCAAGGCCGGCCCGGCACTGGCCGCCGGTTGCACCATGGTGATCAAGCCGGCTTCGCAGACCCCGTT CTCCGCCCTGGCCCTGGTCGAGCTGGCCGAGCGCGCCGGCATCCCGAAAGGTGTGCTGAGCGTGGTCACCGGCAGCGCCG GCGAAGTCGGTGGCGAGCTGACCAGCAACCCCATCGTGCGCAAGCTGTCCTTCACCGGCTCGACCGAGATCGGTCGTCAG CTGATGGCCGAATGCGCCCAGGACATCAAGAAGGTGTCGCTGGAGCTGGGCGGCAACGCGCCGTTCATCGTCTTTGATGA CGCCGATCTGGATGCCGCAGTCGAAGGCGCGCTGATCTCCAAGTACCGCAACAACGGCCAGACCTGCGTCTGCGCCAACC GTATCTACGTGCAGGACGGCGTCTACGATGCCTTCGCCGAGAAGCTGATCGCCGCTGTATCCAAGCTGAAGATCGGCAAC GGTCTGGAGGACGGCACCACCACCGGCCCGCTGATCGACGAGAAGGCCGTGGCCAAGGTGCAGGAGCACATCGCCGACGC GGTGAACAAGGGCGCCAAACTGGCCCTGGGCGGCAAGCCGCATGCCCTGGGTGGCACCTTCTTCGAACCGACCATTCTGG TGGACGTGCCGAAAACCGCTGCCGTGGCCAAGGAAGAGACCTTCGGCCCGCTGGCGCCGCTGTTCCGCTTCAAGGACGAG GCCGAGGTGATCGCCATGGCCAACGATACCGAGTTCGGCCTGGCTTCCTACTTCTATGCCCGCGACCTGGGCCGCGTGTT CCGCGTGGCCGAGGCGCTGGAGTACGGCATGGTGGGCATCAACACCGGCCTGATCTCCAACGAAGTCGCGCCGTTCGGCG GCGTGAAGGCTTCCGGCCTGGGCCGCGAAGGCTCCAAGTACGGGATCGAGGACTACCTCGAGATCAAGTACATGTGCCTG GGCGGCATCTGA Protein sequence : MQLKDPQLLRQQAYIHGQWLDADSGQTIAVNNPATGEIIGHVPKMGRAETRRAIEAAEKALPAWRALTAKERANKLRRWF ELLMENQDDLGRLMTLEQGKPLAEAKGEIAYAASFIEWFAEEAKRVYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVIKPASQTPFSALALVELAERAGIPKGVLSVVTGSAGEVGGELTSNPIVRKLSFTGSTEIGRQ LMAECAQDIKKVSLELGGNAPFIVFDDADLDAAVEGALISKYRNNGQTCVCANRIYVQDGVYDAFAEKLIAAVSKLKIGN GLEDGTTTGPLIDEKAVAKVQEHIADAVNKGAKLALGGKPHALGGTFFEPTILVDVPKTAAVAKEETFGPLAPLFRFKDE AEVIAMANDTEFGLASYFYARDLGRVFRVAEALEYGMVGINTGLISNEVAPFGGVKASGLGREGSKYGIEDYLEIKYMCL GGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-163 | 69 |
