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Name : Pmen_2057 (Pmen_2057) Accession : YP_001187550.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2275867 - 2277480 bp Length : 1614 bp Strand : - Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase DNA sequence : ATGAGCCAGAACGAAACCCTGCTGCAAGTACGCGACCTGGCCGTCGAGTTCGTCATGGGCGAACAGTGCCAGCGCGTGGT CGAAGGCGTCAGCTTCGACATCCATAAAGGCGAGACCCTGGCCCTGGTTGGCGAGAGCGGCTCGGGCAAGTCGGTTACGG CGCACTCCATCCTGCGCCTATTGCCCTACCCGCTGGCGCGGCATCCGGCCGGCAGCATCGAGTACGCCGGGCAGGATCTG CTCAAGCTCGGCGAGGGCCGCCTGCGCGGCATCCGTGGCAACCGCATCGCCATGGTCTTTCAGGAGCCGATGACCTCGCT CAACCCGCTGCACTGCATCGAGAAGCAGATCAACGAGGTGCTCGCCCTGCACAAAGGGTTGCGCGGCAAGGCCGCCAGCG CACGTACCCTGGAGCTGCTGGAACTGGTGGGCATTCCCGAACCGAAGAAGCGCCTGAAGGCCTACCCGCACGAACTTTCC GGCGGCCAGCGGCAGCGGGTGATGATCGCCATGGCCCTGGCCAACGAGCCCGAGCTGCTGATCGCCGACGAGCCCACCAC CGCGCTGGACGTCACCGTGCAGCTGAAAATCCTCGAACTGCTCAAGGATCTGCAGGCGCGCCTGGGCATGTCCTTGCTGC TGATCAGCCACGATCTCAACCTGGTACGCAGAATTGCCCATCGCGTATGTGTCATGCAGCGCGGTCGCATCGTCGAACAG GCGTCGTGTGAACAATTGTTCCAGGCTCCAGAGCATCCCTATACCCGGGAACTGCTCGGCGCCGAGCCCAGCGGCGATCC CGCGGCCAACCCCGTGGGCCAGCCGATACTGGAAGTGGACGACCTGCGCGTGTGGTTCCCGATCAAGAAGGGGCTGCTGC GCCGGACGGTGGATCATGTCAAGGCAGTGGACGGCATCAACTTCAGCCTGCCCCAGGGCCAAACCCTGGGCATCGTGGGT GAAAGCGGTTCCGGTAAGTCCACCCTGGGCATGGCCATTCTGCGGTTGCTCGCCAGCCGCGGTGACATCCGCTTTCAGGG CCAGCAGCTGCAGGGCATGAGCCAGCATGAGGTACGCCCCCTGCGGCGACAGATGCAGGTGGTGTTCCAGGACCCCTTCG GTAGCCTGAGCCCACGCATGTCGGTGGCCCAGATCGTCGGAGAAGGCCTGCGCATTCACCGCATGGGCAGCGAGGCAGAG CAGGAACAGGCGATCATCGACGCGCTTTTGGAGGTAGGGCTGGACCCGCAGACGCGGCATCGCTACCCCCACGAGTTTTC CGGCGGGCAACGGCAGCGGATTGCCATTGCCCGGGCACTGGTGTTGAAACCGGCGCTGATTCTGCTGGACGAGCCCACCT CGGCGCTCGACCGCACGGTTCAGCGCCAGGTGGTGGAGTTGTTGCGCGGCTTGCAGGCCAAGTACAACCTGACCTATCTG TTTATCAGCCATGACCTGGCGGTAGTCAGAGCGCTGAGCCACCAGTTGATGGTGGTCAAGCAGGGCCAGGTAGTGGAACA GGGGTCTGCCGAGTCGATCTTCAGCGCACCGCAACACCCTTATACGCAGCAGTTGCTGGAAGCCGCTTTCATGGCCCCGG CAACGGCTCACTGA Protein sequence : MSQNETLLQVRDLAVEFVMGEQCQRVVEGVSFDIHKGETLALVGESGSGKSVTAHSILRLLPYPLARHPAGSIEYAGQDL LKLGEGRLRGIRGNRIAMVFQEPMTSLNPLHCIEKQINEVLALHKGLRGKAASARTLELLELVGIPEPKKRLKAYPHELS GGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKDLQARLGMSLLLISHDLNLVRRIAHRVCVMQRGRIVEQ ASCEQLFQAPEHPYTRELLGAEPSGDPAANPVGQPILEVDDLRVWFPIKKGLLRRTVDHVKAVDGINFSLPQGQTLGIVG ESGSGKSTLGMAILRLLASRGDIRFQGQQLQGMSQHEVRPLRRQMQVVFQDPFGSLSPRMSVAQIVGEGLRIHRMGSEAE QEQAIIDALLEVGLDPQTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRGLQAKYNLTYL FISHDLAVVRALSHQLMVVKQGQVVEQGSAESIFSAPQHPYTQQLLEAAFMAPATAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-82 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-82 | 44 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-82 | 44 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-82 | 44 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 5e-102 | 42 |
