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Name : Pmen_1988 (Pmen_1988) Accession : YP_001187481.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : transposase IS66 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 2198715 - 2200277 bp Length : 1563 bp Strand : - Note : PFAM: transposase IS66 DNA sequence : ATGATCGCCGTGCCCGCCCCCCTTCCTGACGACCCAATCCTGCTCAAGCATTTACTGCTGCTGGCCAGTGAACAGGCGGC TGCGAAAGATGCTCGCATAGAACAACTTCAGGAACAGGTCGCCCTGCTGCGCCACAAGTTGTTCTCGCCCAAGTCCGAGC GCAGCCCTGAAGACGCCGACTCACCGCAGTTGGCCATGTTCAACGAGGTCGAAGAGCTGATCGAAGCGGCCGCTGCGCCA AGCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGAAATCGTTGCGCCGGTCAAGCGCCGTGGCAAGCGCAAGCCGTT GCCGGCCAACCTGCCGCGTGTCGAAGTCATCCACGACCTGCCCGAGCACGAGCTGACTTGCGCCTGTGGCGCCTGCAAAC AAGTCATCGGCGAGGAGACCAGCGAACAGCTGGAGATTATCCCGATGCAGGTGCGGGTCATCCGCCATATCCGCAAGACC TACGCCTGCAAGGCCTGCGAAGCGGCGCCGCTCACTGCCGACAAGCCGGCCCAACTGATCGAGAAGAGCCTGGCCAGCCC CAGCGTGTTGGCCATGCTGCTGACCACCAAGTACGCCGACGGCATCCCGCTGTACCGCTTCGAGAAGATGCTCAGCCGCC ACGGCGTCGACATACCACGCCAGACCCTGGCGCGCTGGGTGATCCAGAGCGGTGAACAGCTGCAACCGCTGCTCAACCTG CTGCGCGACAAGCTGCTCGAATACCCCGTTTTGCACTGCGACGAAACGCGCCTGCAGGTGCTGCATGAACCGGGACGCGA TCCCACCGCGCAGTCCTGGATGTGGGTACAAAGCGGTGGACCACCGGATAAGCCGGTGATCCTCTTCGACTACACCGCCA GCCGCGCGCAGGAGGTGCCGCTGCGCTTGCTCGACGGCTATCGCGGCTACCTGATGACCGACGACTACGCCGGCTACAAC GCCGTGGCCGCGCAAGAAGGCATCGAACGCCTCGGCTGCTGGGCGCATGCGCGGCGCAAGTTCGTCGAGGCGCAGAAAGT GCAACCCAAGGGCAAAACCGGCCGTGCCGACATGGCGCTGAACCTGATCAACAAGCTCTACGGCATCGAGCGTGACCTGA AGGACGCCTGCGATACCGAGCGCCTGGTCGCCCGTCAGCAACGCAGCCAGCCGCTGCTCGATCAACTCAAGACCTGGCTG GACAAGACCCAGCCGCAGGTCGTCGGGCAGACGGCGCTGGGCAGGGCGGTGAACTACCTGGCCAGCAACTGGAGAAAGCT GGTGCGCTACGTCGAAGGTGGACATCTGCCGATCGACAACAACCGCGCGGAGAACGCCATCCGCCCGTTCGTTATCGGGC GCAAGAACTGGCTGTTCAGCGACACGCCCAAGGGGGCCACGGCCAGCGCACAGATCTACAGCCTGATCGAAACCGCCAAG GCCAATGGCCAGGAGCCTTACGCCTGGCTGCGCCACATCCTCGAACGCCTGCCGGCCGCCAATAGCGTCGAGGATTACGA AGCGCTGCTGCCGTGGAATTGCTCGCCAGTGAGCGCATCCTGA Protein sequence : MIAVPAPLPDDPILLKHLLLLASEQAAAKDARIEQLQEQVALLRHKLFSPKSERSPEDADSPQLAMFNEVEELIEAAAAP SEAEAEAEAEAEEIVAPVKRRGKRKPLPANLPRVEVIHDLPEHELTCACGACKQVIGEETSEQLEIIPMQVRVIRHIRKT YACKACEAAPLTADKPAQLIEKSLASPSVLAMLLTTKYADGIPLYRFEKMLSRHGVDIPRQTLARWVIQSGEQLQPLLNL LRDKLLEYPVLHCDETRLQVLHEPGRDPTAQSWMWVQSGGPPDKPVILFDYTASRAQEVPLRLLDGYRGYLMTDDYAGYN AVAAQEGIERLGCWAHARRKFVEAQKVQPKGKTGRADMALNLINKLYGIERDLKDACDTERLVARQQRSQPLLDQLKTWL DKTQPQVVGQTALGRAVNYLASNWRKLVRYVEGGHLPIDNNRAENAIRPFVIGRKNWLFSDTPKGATASAQIYSLIETAK ANGQEPYAWLRHILERLPAANSVEDYEALLPWNCSPVSAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAF71494.1 | unknown | Not tested | Hrp PAI | Protein | 2e-170 | 71 |
