Gene Information

Name : glcE (Pmen_0202)
Accession : YP_001185708.1
Strain : Pseudomonas mendocina ymp
Genome accession: NC_009439
Putative virulence/resistance : Unknown
Product : glycolate oxidase FAD binding subunit
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0277
EC number : -
Position : 205097 - 206152 bp
Length : 1056 bp
Strand : -
Note : PFAM: FAD linked oxidase domain protein

DNA sequence :
ATGCAGCAGGATTTCGACGCCAGCGCCGCGCTGCTGGAACAGGTCAACCACGCGCTGAACAGCGCCACGCCGCTGCGCAT
CCAGGGCAGCGGCAGCAAGGCCCATCTGGGTCGCGCCACCCCGGGCGAAGTGCTGGACACCCGTCAGCATCGCGGCATCG
TCAGCTATGACCCCACCGAGCTGGTGCTCACCGCCCGTGCCGGGACGCCGCTGGCCGAGATCGAGTCGGCGCTGGAGGCG
AACAACCAGATGCTGCCGTGCGAGCCGCCGCACCTGGGCGATGGCGCCACCCTGGGTGGCATGGTCGCCGCCGGGCTGTC
CGGCCCGCGCAGGCCCTGGGCCGGTTCGGTGCGCGACCAGGTGCTCGGCACCCGCGTGATCACCGGCCAGGGCAAGCTGC
TGCGCTTCGGCGGCGAGGTGATGAAGAACGTCGCCGGTTACGACCTGTCGCGCCTGATGGCCGGCAGCTTCGGCTGCCTC
GGCCTGCTCGCCGAGGTGTCGCTCAAAGTGCTGCCCAAACCGCGTCAGGTGCTCAGCCTGCGCCTGGTAATGGACGCTCA
GCAGGCGCTGAACAAGCTCGCCGAATGGGGGCAGCAGCCGCTGCCGATCAGCGCGGCCAGCCATGACGGTGCGGCGCTGC
ATCTGCGCCTGGAAGGCGGCGAAGGCTCGGTTCTGGCCGCGCGCCAACGCCTGGGCGGCGAGGAGATCGACAACGCTTAC
TGGTATGAGCTGCGCGAGCAGCGCCTGCCGTTCTTCGCCGGCGAAGGCACGCTGTGGCGGCTGTCATTGCCGCTGAACAG
CGCTCTGCTCGTCCTGCCCGGCCGCCAGCTGATCGACTGGGGCGGCGCGCAGCGCTGGCTGAAGTCCGATGCCGACGGCG
AACTGATCCAGCGCGTGGCCGCCAAGCTCGGCGGCCACGCCACCTGCTTCGCCGCCGGCCAGACGCAACCCTTCCAGCCG
CTGGCGGCGCCGCTACTGCGCTACCAGCGCCAGCTGAAGAACCAGCTCGACCCCCAGGGCATCTTCAACCCTGGCCGCCT
ATACGCCGAGGTATAA

Protein sequence :
MQQDFDASAALLEQVNHALNSATPLRIQGSGSKAHLGRATPGEVLDTRQHRGIVSYDPTELVLTARAGTPLAEIESALEA
NNQMLPCEPPHLGDGATLGGMVAAGLSGPRRPWAGSVRDQVLGTRVITGQGKLLRFGGEVMKNVAGYDLSRLMAGSFGCL
GLLAEVSLKVLPKPRQVLSLRLVMDAQQALNKLAEWGQQPLPISAASHDGAALHLRLEGGEGSVLAARQRLGGEEIDNAY
WYELREQRLPFFAGEGTLWRLSLPLNSALLVLPGRQLIDWGGAQRWLKSDADGELIQRVAAKLGGHATCFAAGQTQPFQP
LAAPLLRYQRQLKNQLDPQGIFNPGRLYAEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcE CAE85244.1 GlcE protein Not tested PAI V 536 Protein 2e-102 67