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Name : Pmen_1902 (Pmen_1902) Accession : YP_001187396.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis sensory transducer Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 2090316 - 2091881 bp Length : 1566 bp Strand : - Note : TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein DNA sequence : ATGCGTAACAACCAGCCGGTCACTCAGCGCGAACGCACCTTCCCCGCTCAGCAGCGCCTGATTTCCACCACCGACCTCAA GGGCCAGATCACCTACTGCAACGATGCCTTCGTCGAGATCAGCGGTTTCTCCCGCGAGGAACTGCTGCGCGCGCCGCACA ACATCGTGCGTCACCCGGACGTGCCGCCAGCGGTGTTCGACCACATGTGGACGACCCTGAAGAAGGGCCGGCCGTGGATG GGCATCGTCAAGAACCGCAGCAAGAATGGCGACCATTACTGGGTCAACGCCTACGTCACCCCGATGACCGAGAACAACCA GGTCGTCGGTTACGAATCGGTACGGGTCAAACCCACTGCCGAACAGGTACGCCGCGCCGAAGCGCTGTATGCGCGGGTCA ACGCCGGCAAGTCGGCCGTCCCCGCCAGCAACCAGTGGCTGCCCATCGTTCAGGCCTGGATGCCCTTCATTCTGGTCAGC CAGATCGGTTTTCTGATCGGCCACTGGATCGGCAGCAACTGGGGGTTCATCCTCGCCGCCCTGCTCTCCGTTCCCCTGGG CCTGGCCGGCATCGCCTGGCAGACCCGTGGCATCAAGCGCCTGCTGCGCATCGCCGATCAGACCACCTCCGACCCGCTGA TCGCGCAGATGTACACCGACAGCCGCGGCGCCGAAGCGCGCCTTGAAATGGCCATGCTCAGCCAGGATGCGCGCCTGAAA ACCTGCCTGACCCGCCTGCAGGACACCGCCGAACAGCTCACCCAGCAGGCGCGTGAAGCCGACAAGCTGGCGCACAACAG CTCGGCCGGTCTCGAGCGCCAGCGCAGCGAGACCGAACAGGTCGCCACGGCGGTCAACGAAATGGCCGCCACCACTCTGG AAGTGGCCAGCAACGTCGCCCGTACCGCCATCGCCACTCAGGAAGCCAACCGCCTGACCAGCGAAGGGCGCAGCATTGCC GCGGAAACCCGCGAAGCCATCCAGCGCCTGTCGCAATCGGTGGGCGATACCGGCGAGACCGTCACCCGCCTGGCCCAGGA CAGCAATGAGATCGGCGGCGTGGTCGACGTGATCAAGGGCATCGCCGATCAGACCAACCTGCTCGCCCTCAATGCCGCCA TCGAAGCCGCACGTGCCGGCGAAATGGGCCGCGGCTTCGCCGTGGTGGCCGACGAGGTTCGCTCCCTGGCCCAGCGCACC GCGGAATCCACCGAACAGATCCACACCCTGATCGCCAAACTGCAGCGCACCGCCGAAGAGGCCGTGATGACCATGGAAAT CGGCCGCAAGCAGGCCGACGAAGGCGTGGAGCGAGTGCTCAAGGCCGACCAGGCCCTGGCCGGCATCAGCGACTCGGTGG CCAACATCGCCGACATGGCCAACCAGATCGCGGCCGCGGCCGAAGAGCAGAGCGCCGTAGCTGACGAGATCAACCAGAAC ATCACCACCATCGCCCAACTGGCCGACCAGACCGCAGGCGAAGCCAAAAGCACCGCCAAGCTCAGCGAGGCGCTCACCAC TACCGCACAGGGCCAATACGCCCTGGTCGAGCGCTTCAACCGCTGA Protein sequence : MRNNQPVTQRERTFPAQQRLISTTDLKGQITYCNDAFVEISGFSREELLRAPHNIVRHPDVPPAVFDHMWTTLKKGRPWM GIVKNRSKNGDHYWVNAYVTPMTENNQVVGYESVRVKPTAEQVRRAEALYARVNAGKSAVPASNQWLPIVQAWMPFILVS QIGFLIGHWIGSNWGFILAALLSVPLGLAGIAWQTRGIKRLLRIADQTTSDPLIAQMYTDSRGAEARLEMAMLSQDARLK TCLTRLQDTAEQLTQQAREADKLAHNSSAGLERQRSETEQVATAVNEMAATTLEVASNVARTAIATQEANRLTSEGRSIA AETREAIQRLSQSVGDTGETVTRLAQDSNEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRSLAQRT AESTEQIHTLIAKLQRTAEEAVMTMEIGRKQADEGVERVLKADQALAGISDSVANIADMANQIAAAAEEQSAVADEINQN ITTIAQLADQTAGEAKSTAKLSEALTTTAQGQYALVERFNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 1e-69 | 42 |
