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Name : Pmen_1133 (Pmen_1133) Accession : YP_001186632.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : superfamily I DNA/RNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1112 EC number : - Position : 1271975 - 1274719 bp Length : 2745 bp Strand : + Note : - DNA sequence : ATGGTTGCTATCTATGTCGATGGGCAGGACAAGACTAAACAAATCAGCGATTGGCGCATCTGGTGGGATGAAAAAGCCGA AGTCTTGAAGCTGACGTGCCATTACCCGTCCACGAAGAAATACACTCGTCCTCTAAGTGTTTGTCGCGTCGAACCCACGC GCGAGTTACGCAATGTGCTGCTGGAGAAACAGGACAGTATCGTCAGTACCACTGTCGAACGGGTCGAGATCTACGGTGAG CGCTATGCCGTGGTCTATTACTCCAAGGATGCCCGACGACCGTACGTCCGTAACCTGGACGGCATCAGGTTCGTTTCACC TACCGGCATAAAGGACGAACCCGTTTTCGGTTATTTCCAGGCAGTCGCCAATGCCTGGGTCGACACCGCGAAAACTGCGG ACGATAAGCAGATTGCCGCCAACGTTGTGAAGCAATTGAAGGAACTGCCTGTTCTTTCGTCGAGTGCCTTGCAGGCATAT TGCTCGGGCAGCAATGAGGCTCGGTTACCTGGCGAGGGTTTGATCTATCCCTTCGGTATCAACGAAAGCCAGCTCATGGC GGTCGAGCAGGCCTTCAGCGCGCAGATCAGTCTGATCGAGGGGCCGCCGGGGACGGGCAAGACCCAGACCATTCTCAATA TCCTCGCCAATATCCTTCTGCGCGGTCAGACGGTCGCCGTACTATCCAACAACAATGCCGCCGTGGAAAACGTCTACGAG AAGCTGGGCAAGTCTGGCCTGGACTATCTAGTGGCCAAGCTGGGCAACCGGGACAACCGCGAAGACTTCTTCGCCCAGGT GCAGCCCGTGCCATCTGGCGAGCCCGAGCCAGCTCCGCCGATGGAGGAAATCCAGGCTGTACTGGAGCGGCTGAAGCGTC TCCTGCACGAGCATAATCTGGCGGCCCAGCTCAAGGCGGAAATCGATGAGTTGAACATTGAGCGGCGTTATCTGGAGCAA TGGCAGAAGGACAACGGCGCTCAGCCAACCGCCTCCTTGGCCAGGTATCGTCTATCCCCGCGCGAGACCACGGACCTGAT GGCCTATCTCGCCCATCTAACGGGGCAGCGGTTGCGGCTCAAGGATCGGTTCGAGCTGCTCTTCAAGTTCAGGATTTTCC GCGCCAAACCGCTCGCCGACGAGGAAGCGCGTTTGTCCTTCTTCGATGCCTTACAGTCGCACTTCTACGACGAGCTGCTG CGCAAGAAGGAAGACGACCTGCGCACGTGTAACGAGGCATTGGCGCGTGGTGACTTCAGTGCGCTGCTGGAGGAGCTGAT GCTGGGGTCGATGCGTATGCTCAAGCATCGCTTGCATGAGCAGATTCGCGATTCCCACAGCTTCGATGCGAAGACCTATC GCAAGCACTTCGATGCATTTGTGAAGCGCTTTCCCATACTTGGTAGCAGCACCCATTCGATCGTCAACTCGATCGCGCCT GGAGCTGTGCTTGACTACGTCATCATCGACGAGGCCTCACAGCAGGACATCGTGCCGGGCATTCTGGCGTTGGGCTGCGC GAAGAACCTGATCGTGGTCGGCGACAACAAGCAGTTGGCGCATATTCCTGCAGCGACTGGCCTGGCGGCTCCGCTGGAAC CTTACGATTGCGAGCGCTACAGCCTGCTCGACTCCTGCATGCAAGTGTTCGGGGACGCGATGCCCAAGACCTTGCTCAAG GAGCACTACCGCTGCCATCCCAGGATCATCCAGTTCTGCAACCAGCAGTTCTATGCCGATGCCCTGGTGCCCATGACAGA GGATAACGGCGAAGCGCCCTTGCGCTTAGTGGTGACTGCCAAGGGCAATCATGCCCGCAAGAACATCAACCTCAGAGAGG TGGAGTCCTTGCTCAAGGTGCTTGAGGGCGATGGTGAGGGCGCGTGGGTAGACGGCGACGGGCGCGGTTTGATCGCGCCG TTCAGGGCGCAGGCTACGCTCTCCAAGGCGCACCTGCCCGATGACTTCGTGACCGATACCGTGCACAAGTTTCAGGGGCG CGAATGCGATGAAATCGTTTTCTCTACGGTGCTGGACAAGAAGCAATACAACCAGAGCCAAGGCCGCCTGAGCTTCGTCG ATGATCCGCGCATGGTCAACGTGGCCGTTTCGCGGGCCAAGCACCGTTTCACCTTGGTAACGGGGGACGAGGTTTTCGCC AGGAATAATGGCCCTGTCGCAGCCTTGATCCGTTACATCGAATACTACGCCGAGGATAAAGAGATTCAGCGGGCACCGGT GGTTTCGGCGTTCGACCTGCTCTACAAGGAATACGATAAATCCCTAGAGCGCCTGCGCAACCGTTTGAGGAAGGAGGACT CACGCTTTGTCTCCGAGCAGATCATGGCGCAGATACTGCGTGAAGCATTTGCAGACGACGCGTTGCAGGCGCTGAAGTGG CACAAAGAGGTGGCGTTGAACAAGATCGCTGTCGCGGAAAATCCTCAATTGACTGATCACGAGCGCCAGTTCATGCGCCG TTCCAGTTGCGATTTCGTGATCTATTTCAGGGTCGGTAAGCGGCCGGTAGGGGTGATTGAGGTTGACGGCGGCTCGCATG ACAAACCTGATCAGATCGTGCGGGATAACCTCAAGAACAGCATTCTGAAGAAAAGTGGCATTGACGTTCTGCGTGTACGC ACCGTCGATAGCGGCATCGAAGAAACGGTGCGCGATTTTCTCGCCCAGTGGGCGAGCCCGGAGTCAGGCCCGCTCGTTAC TCTGAGCGGACCTGAAAGCACTTAG Protein sequence : MVAIYVDGQDKTKQISDWRIWWDEKAEVLKLTCHYPSTKKYTRPLSVCRVEPTRELRNVLLEKQDSIVSTTVERVEIYGE RYAVVYYSKDARRPYVRNLDGIRFVSPTGIKDEPVFGYFQAVANAWVDTAKTADDKQIAANVVKQLKELPVLSSSALQAY CSGSNEARLPGEGLIYPFGINESQLMAVEQAFSAQISLIEGPPGTGKTQTILNILANILLRGQTVAVLSNNNAAVENVYE KLGKSGLDYLVAKLGNRDNREDFFAQVQPVPSGEPEPAPPMEEIQAVLERLKRLLHEHNLAAQLKAEIDELNIERRYLEQ WQKDNGAQPTASLARYRLSPRETTDLMAYLAHLTGQRLRLKDRFELLFKFRIFRAKPLADEEARLSFFDALQSHFYDELL RKKEDDLRTCNEALARGDFSALLEELMLGSMRMLKHRLHEQIRDSHSFDAKTYRKHFDAFVKRFPILGSSTHSIVNSIAP GAVLDYVIIDEASQQDIVPGILALGCAKNLIVVGDNKQLAHIPAATGLAAPLEPYDCERYSLLDSCMQVFGDAMPKTLLK EHYRCHPRIIQFCNQQFYADALVPMTEDNGEAPLRLVVTAKGNHARKNINLREVESLLKVLEGDGEGAWVDGDGRGLIAP FRAQATLSKAHLPDDFVTDTVHKFQGRECDEIVFSTVLDKKQYNQSQGRLSFVDDPRMVNVAVSRAKHRFTLVTGDEVFA RNNGPVAALIRYIEYYAEDKEIQRAPVVSAFDLLYKEYDKSLERLRNRLRKEDSRFVSEQIMAQILREAFADDALQALKW HKEVALNKIAVAENPQLTDHERQFMRRSSCDFVIYFRVGKRPVGVIEVDGGSHDKPDQIVRDNLKNSILKKSGIDVLRVR TVDSGIEETVRDFLAQWASPESGPLVTLSGPEST |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1202 | NP_286737.1 | hypothetical protein | Not tested | TAI | Protein | 0.0 | 56 |
| Z1642 | NP_287145.1 | hypothetical protein | Not tested | TAI | Protein | 0.0 | 56 |
| S15 | AAQ19138.1 | putative UvrD/REP helicase-like protein | Not tested | PAI I CL3 | Protein | 0.0 | 54 |
| uvrD2 | ADD91734.1 | putative UvrD/REP helicase-like protein | Not tested | PAI-I AL862 | Protein | 0.0 | 54 |
