|
Name : Pmen_1107 (Pmen_1107) Accession : YP_001186606.1 Strain : Pseudomonas mendocina ymp Genome accession: NC_009439 Putative virulence/resistance : Unknown Product : ornithine carbamoyltransferase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0078 EC number : 2.1.3.3 Position : 1243331 - 1244341 bp Length : 1011 bp Strand : - Note : catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway DNA sequence : ATGGCTTTCAACATGCACAACCGTAACCTGCTCAGCCTGATGCACCACAGCACCCGCGAGCTGCGTTACCTGCTCGACCT CTCGCGCGACCTCAAGCGCGCCAAGTACACCGGCACCGAGCAGCAGCACCTCAAGCGCAAGAACATCGCGCTGATCTTCG AGAAGACCTCCACCCGCACCCGCTGCGCCTTCGAGGTCGCCGCCTATGACCAGGGCGCCAACGTCACCTACATCGACCCG GGCTCCTCGCAGATCGGCCACAAGGAATCGATGAAGGACACCGCCCGCGTGCTCGGGCGCATGTACGACGCCATCGAATA CCGCGGCTTCAAGCAGGAGATCGTCGAGGAACTGGCCACCTACGCCGGCGTGCCGGTGTTCAACGGCCTGACCGACGAAT ATCACCCGACGCAGATGCTCGCCGACGTACTGACCATGCGCGAGCACAGCGACAAGCCGCTGCACGAGATCAGCTATGCC TACCTGGGCGACGCGCGCAACAACATGGGCAACTCGCTGCTGCTGATCGGCGCCAAGCTCGGCATGGACGTGCGCATCGC CGCGCCCAAGGCACTGTGGCCGAGCGACGAGCATGTCGCCGCCTGCAAGAAATTCGCCGAGGAAAGCGGTGCGCGCATCA CCCTCACCGAGGACGCCAAGGAAGCGGTCAAGGGCGTCGATTTCGTCCACACCGACGTCTGGGTATCCATGGGCGAGCCG GTGGAGGCCTGGGGTGAGCGCATCAAGGAGCTGCTGCCCTATCAGGTCAACATGGACATCATGAAGGCCACCGGCAACCC GCGAGCCAAGTTCATGCACTGCCTGCCGGCCTTTCACAACAGCGAGACCAAGGTCGGCAAGCAGATCGCCGAACAGTATC CGCACCTGAAGAACGGTATCGAGGTCACCGAGGACGTGTTCGAGTCGCCCTACAACATCGCCTTCGAGCAGGCGGAAAAC CGCATGCACACGATCAAGGCGATCCTCGTCTCGACCCTGGCGGATATCTGA Protein sequence : MAFNMHNRNLLSLMHHSTRELRYLLDLSRDLKRAKYTGTEQQHLKRKNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDP GSSQIGHKESMKDTARVLGRMYDAIEYRGFKQEIVEELATYAGVPVFNGLTDEYHPTQMLADVLTMREHSDKPLHEISYA YLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPSDEHVAACKKFAEESGARITLTEDAKEAVKGVDFVHTDVWVSMGEP VEAWGERIKELLPYQVNMDIMKATGNPRAKFMHCLPAFHNSETKVGKQIAEQYPHLKNGIEVTEDVFESPYNIAFEQAEN RMHTIKAILVSTLADI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arcB1 | YP_186044.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 2e-91 | 58 |
| argF | YP_493760.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 2e-91 | 58 |
| SE0103 | NP_763658.1 | ornithine carbamoyltransferase | Not tested | SCCpbp4 | Protein | 8e-94 | 58 |
| argF | NP_645867.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 6e-91 | 58 |
| argF | NP_371693.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 4e-91 | 58 |
| argF | NP_374285.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 4e-91 | 58 |
| SAKOR_01090 | YP_008491278.1 | Ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 5e-91 | 58 |
