Gene Information

Name : Pmen_1015 (Pmen_1015)
Accession : YP_001186515.1
Strain : Pseudomonas mendocina ymp
Genome accession: NC_009439
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3008
EC number : -
Position : 1148644 - 1150947 bp
Length : 2304 bp
Strand : +
Note : PFAM: Mammalian cell entry related domain protein

DNA sequence :
ATGACTGATCTGCCAATGGCAAAAACACGGCCGGCCTCCAACTGGTCGGCCATCTGGGTTCTGCCGCTGATTGCCCTGCT
GATTGGTGGCTGGCTGGCCTGGCGTGCCTATAGCGAGGCCGGCATCGAGATTCAGGTGATGTTCGAAAGCGGCGACGGCA
TTCAGGCCGGCAAGACCGAGGTGATCTACAAGGGGATGCCGGTCGGCAAGGTCATCGCCCTGACGCTGGATCGCAGCGAG
GCACGGCGTGGGGTAATCGCCACGCTGGAGATGAACAAGGAAGTGGAGGCCCGCTTGGTCACGGGGACTCGCTTCTGGCT
GGTCAAACCCAGTGTCACGCTGGCGGGTGTCACCGGATTGGAAACCCTGGTGTCCGGCAATTACATCGCCGTAAGCCCTG
GTGAAGGCGAACCGAGCCGTGAATTCACCGCCTTGCCCGAGGCGCCGCCGCTGGCGGACGATGTGCCTGGACTGCACCTG
ACACTCAAGGCCGAACGCCTGGGGTCGCTGAACAAGGACAGCCCGGTGTTCTACAAGCAGATCCAGGTGGGCCGGGTGAA
GAGCTTCGCCCTTGCCGAGAACCAGAGCACGGTGGAGGTGAAGGTCTTCATCCAGCCGGAGTACGCCAGCCTGGTACGCA
AGCACACGCGTTTCTGGAACGCCAGCGGCATCTCCGTCGATGCCGGGCTGTCGGGGGTGAAGGTGCGCACCGAGTCGCTG
GCAAGCATCGTTGCCGGCGGTATCGCCTTTGCTACACCCGAGCATCGTACCGACAGTCCTGCAACCGACCCCAGCATCCC
CTTCCGCCTCTACGAGGATTACGAGGCGGCCCAGGCCGGCATCCGCATTTCGCTCAAGCTGCATGACTTCGAAGGCCTGG
AGCCGGGACGTACCCCGGTGATGTACAAAGGTATCCAGGTCGGCCATATGAAGACGTTCAAGGTCGACAAGGATCTGAGC
GGCGCCCAGGTGGAACTGATGCTCGACCCGCGTACCGAGGACTACCTGGTCGAGGGTACCGATTTCTGGGTGGTCAGGCC
GTCCATCTCGCTGGCCGGTATCACCGGGCTGGAGGCACTGGTCAAGGGCAACTACATCGCCATTCGCCCCGGCGAAAGCG
GCAGCCCGCCTCGGCGCGAGTTCGAGGCGCGAGCCAAGGCGCCGCCGCTGGATCTGGGTGCACCTGGCTTGCACCTGGTG
CTTTTCAGCGACAGCCTGGGCTCGATGGAAGTGGGAAGTCCGATTCTTTTCCGGCAGATCAGAGTGGGCAGCGTGCAGAG
CTTTCAGCTGTCGCGCGACGACAGCCAGGTGGTGCTGGGTGTGCATATCGAGCCGGAATACAGCCATCTGGTGAACAGTT
CGACCCGCTTCTGGAACGCCAGCGGTATCACGCTAAAAGGCGGATTGTCGGGAGTGGAGCTCAAGAGCGAGTCGCTGCAG
ACATTGCTCGCCGGCGGCATTGCGTTCGAAACACCGGATCCCAAGGCAGCCAGGGGCGAAGGTCGAGTGCTGCGTTTCGC
CCTGCATGCCGATCGCGACGATGCCTTGCAGCCCGGTCTGCAGATTGGCATCCGCGTTGCCGATGGTGACGGCCTGCAGC
CCGGCACCCTGGTGCGCTACAAGGGGCTGGAAGTGGGCAAGGTGGAGAATCTGAGCCTGACCGATGACCTGCAGGCGGTA
ATGCTCAATGTGCGCATTACCCAGGCGGCCGAGCAGATCGCCCGTGAGGGCACGCGTTTCTGGGTAGTGAGGCCCGAGTT
GAGCCTGACTCGCGCTGCCAATCTCGGCACCCTGGTCAGCGGTCAGTATCTGGAAGTGCAGCCTGCCGGGCAGAAAGGGG
CGCGGCGTACCGAGTTCGTCGCCCTGGCCAGTGCACCTAATCAGGCCGTGCGCGAAGAAGGCCTGCGCCTGGTGCTGAGC
GCGCCGCGGCGCGGCTCGATCAAGCCGGGCGTGATTGTCAGCTACCGCGAGGTGCCGGTGGGCAAGGTGGTGGATTTCGA
ACTGGGGCCGACCTCGGATCGTGTGCTGATCCATGTGCTGATCGAACCGCGCTATGCACCGCTGGTGCGCAGCGGCAGCC
GTTTCTGGAATGCCAGCGGCATCGGCGTGGATGCCGGGCTGTTCAAGGGCGTGAAGGTGCGAACTGAATCGCTTGAGGCC
TTGCTCGAAGGCGGTATCGCCTTCGCCACGCCGAACAACCCGGAAATGGGCGGCCCGGCGCAGCCGGGGCAGACCTTTGC
CCTGTTCGACGAGCCGCAGGAAGGCTGGATGCAGTGGGCGCCGAAGATCGCGCTGGAGCGATAA

Protein sequence :
MTDLPMAKTRPASNWSAIWVLPLIALLIGGWLAWRAYSEAGIEIQVMFESGDGIQAGKTEVIYKGMPVGKVIALTLDRSE
ARRGVIATLEMNKEVEARLVTGTRFWLVKPSVTLAGVTGLETLVSGNYIAVSPGEGEPSREFTALPEAPPLADDVPGLHL
TLKAERLGSLNKDSPVFYKQIQVGRVKSFALAENQSTVEVKVFIQPEYASLVRKHTRFWNASGISVDAGLSGVKVRTESL
ASIVAGGIAFATPEHRTDSPATDPSIPFRLYEDYEAAQAGIRISLKLHDFEGLEPGRTPVMYKGIQVGHMKTFKVDKDLS
GAQVELMLDPRTEDYLVEGTDFWVVRPSISLAGITGLEALVKGNYIAIRPGESGSPPRREFEARAKAPPLDLGAPGLHLV
LFSDSLGSMEVGSPILFRQIRVGSVQSFQLSRDDSQVVLGVHIEPEYSHLVNSSTRFWNASGITLKGGLSGVELKSESLQ
TLLAGGIAFETPDPKAARGEGRVLRFALHADRDDALQPGLQIGIRVADGDGLQPGTLVRYKGLEVGKVENLSLTDDLQAV
MLNVRITQAAEQIAREGTRFWVVRPELSLTRAANLGTLVSGQYLEVQPAGQKGARRTEFVALASAPNQAVREEGLRLVLS
APRRGSIKPGVIVSYREVPVGKVVDFELGPTSDRVLIHVLIEPRYAPLVRSGSRFWNASGIGVDAGLFKGVKVRTESLEA
LLEGGIAFATPNNPEMGGPAQPGQTFALFDEPQEGWMQWAPKIALER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01493.1 paraquat-inducible protein B Not tested PAGI-1 Protein 0.0 65