Gene Information

Name : Sputcn32_0758 (Sputcn32_0758)
Accession : YP_001182287.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 845479 - 846885 bp
Length : 1407 bp
Strand : +
Note : KEGG: son:SO3917 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase

DNA sequence :
ATGTCACAACAAGGTGCTTTTAAGCCTAAAAGTAAGCCAAGAGATTTGCAGCTAGATGGACTCAAGCTGCCACCGCATTC
TATTGAGGCTGAACAATCGGTATTAGGCGGCCTAATGTTGGACGCCGATGCTTGGGATAAGGTGGCTGAAACGGTCGTAA
AAGAAGATTTTTACTCGCGCTCGCACCGGATGATTTTTGCGGCGATGCACCGCCTAGTGGAAACCAGTCAGCCCATCGAT
TTGATCACGGTTTCTGAGCAACTTGAGCTTGAAAATCAGCTTGAAGAGGCAGGTGGATTTGCCTACTTAGGTGAAATTGC
TAAGAATACTCCCAGTGCCGGCAATATTGTCTCCTATGCTGAGATTGTTCGCGAACGTGCAGTAGTCAGAGAGATGATCC
GAGTCGCCCATGAAATTGCCGATGCGGGTTATAACCCCGAAGGCCGAGACTCCAGTGCTTTGCTCGATTTAGCCGAAAGC
AAAGTCTTTAAGATTGCTGAGCAACGCACCAATGCCAACGAAGGCCCTGAAGGCATCAAAACCATTCTTGAAAAAACCGT
CGATAAGATTGAGAAGCTCTATAACAACCCGCACAACGGTGTAACTGGGGTATCGAGTGGTTTTAGTGATCTCGATAAAA
TGACCGCAGGCTTCCAATCTGGCGACTTGATTATCGTGGCGGCACGTCCATCCATGGGTAAAACGACCTTTGCGATGAAC
CTCTGCGAACAGGCAGCGATGAATGAAGATAAACCCGTACTTATTTTCAGTCTCGAGATGCCATCCGAACAAATTATGAT
GCGTATGCTCGCCTCATTAGGCCGCGTCGATCAGACTAAAATCCGTACTGGTCAACTTGATGATGAAGATTGGGCGCGGG
TGTCATCGACCATGGGGATTATGCTCGAGCAGGGTAAAATGTATATCGACGATGGTTCTGGTTTAACGCCGACGGAAGTG
CGTAGCCGCGCCCGTCGTATTGCTCGTGAATACGGTGGCTTATCTATGATCATGGTCGACTACTTACAGTTGATGCAAGT
GCCCGCTTTATCTGAAAACCGAACGCTTGAAATTGCCGAAATCTCTCGCTCACTTAAAGCCTTGGCGAAAGAACTAGAGA
TCCCTGTTATTGCCCTGTCTCAGCTTAACCGATCACTGGAGCAACGAGCCGATAAACGTCCGGTCAACTCAGACTTACGT
GAATCGGGATCTATCGAGCAGGATGCGGATCTCATCATGTTTATTTACCGTGATGAAGTGTATAACAACGATTCTCCAGA
CAAAGGCACGGCTGAAATTATTATCGGTAAGCAGCGTAACGGTCCTATTGGGCGGGTACGCTTAACCTTCCAAGGTCAGT
ATTCTCGCTTCGATAATTATGCAGGCCCTCAGTTTGAAGAAGATTAA

Protein sequence :
MSQQGAFKPKSKPRDLQLDGLKLPPHSIEAEQSVLGGLMLDADAWDKVAETVVKEDFYSRSHRMIFAAMHRLVETSQPID
LITVSEQLELENQLEEAGGFAYLGEIAKNTPSAGNIVSYAEIVRERAVVREMIRVAHEIADAGYNPEGRDSSALLDLAES
KVFKIAEQRTNANEGPEGIKTILEKTVDKIEKLYNNPHNGVTGVSSGFSDLDKMTAGFQSGDLIIVAARPSMGKTTFAMN
LCEQAAMNEDKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDEDWARVSSTMGIMLEQGKMYIDDGSGLTPTEV
RSRARRIAREYGGLSMIMVDYLQLMQVPALSENRTLEIAEISRSLKALAKELEIPVIALSQLNRSLEQRADKRPVNSDLR
ESGSIEQDADLIMFIYRDEVYNNDSPDKGTAEIIIGKQRNGPIGRVRLTFQGQYSRFDNYAGPQFEED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 5e-98 53
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 1e-100 52
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 4e-101 52
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-102 51
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 3e-93 50
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 3e-93 50
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-101 50
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 4e-86 46
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 1e-81 45