Gene Information

Name : Sputcn32_0696 (Sputcn32_0696)
Accession : YP_001182225.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Resistance
Product : acriflavin resistance protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0841
EC number : -
Position : 782287 - 785370 bp
Length : 3084 bp
Strand : -
Note : PFAM: acriflavin resistance protein; KEGG: shm:Shewmr7_0550 acriflavin resistance protein

DNA sequence :
ATGAATATTGCTGAATACTCCATTCGCCACAAAGTCATTAGCTGGATGTTTGTGTTACTCCTATTAATTGGTGGTGGCAT
CAGCTTTACGGGATTAGGGCAGTTAGAATTTCCCGAATTTACCATCAAAGAAGCCCTAGTGATCACGGCTTATCCCGGTG
CCTCGCCAGAACAAGTTGAAGAAGAAGTTACCCTACCGCTGGAAGATGCCCTACAACAACTCGATGCAGTCAAGCATGTG
ACCTCTATTAACAGTGCGGGTTTGTCACAAATCCAAATTGAGATCAAAGACAGTTACGATAAAACTAGCCTGCCACAGGT
ATGGGATGAAGTGCGCCGTAAGGTCAATGATACTGCGGGCCAATTACCTCCAGGCACAGGGACCCCACAAGTCATGGATG
ACTTTGGCGATGTATACGGGATTTTATTTAATCTTTCAGGGCCAGATTACAGCAACCGAGAACTGAGCAATTACGCCGAC
TATTTACGCCGTGAGTTAGTACTCGTGCCAGGGGTAAAAAAAGTTTCAGTTGTGGGCAGTATTACCGAGCAAGTGGTCAT
TGAAATATCTCAGCAAAAACTCTCGGCGCTAGGGTTAGATCAAAGCTATATCTATGGCCTTATCAATAATCAAAACGTGG
TCTCCAATGCAGGAAGCCTAGTGATTGGTGATAATCGAATCCGCATTCATCCCACTGGTGAATTTGGCAGTATTCAGGAT
CTCGCACGCTTGATTGTCAGTCCACCCGGCAGCACGGAACTTATCTATTTAGGCGATATTGCCAATATCGCAAAGGATTA
TAACGAAACCCCGACAGTGCTTTACCACAACAAAGGCGAAGCTGCGCTATCCCTAGGCATTTCCTTTTCTAGCGGTGTAA
ACGTCGTCGAAGTCGGTCAAAGGGTGAGTGAGCGCCTCGCCGAACTCGAATCCCAACGTCCGATTGGAATGAATTTAGAT
ACAGTCTACAACCAAAGTTCGGCGGTAGATGACACCGTTAATGGCTTTTTAATCAATCTATTAGAGTCAATTGCCATCGT
TATTGCCGTACTGTTGCTGTTTATGGGCTTACGTTCAGGCTTATTAATGGGGCTTATCCTGCTGTTAACCATCTTAGGGA
CTTTCATCGTAATGAAAGTGCTAGGTATTGAGCTACAGCTCATTTCACTCGGTGCGTTGATTATCGCCTTAGGTATGTTG
GTCGATAACGCGATTGTTGTCACCGAAGGAATTTTAATTGGCCTTCGCCGTGGCAAGACGCGCTTAGAAGCGGCAAAACA
AATTGTCTCCCAGACTCAATGGCCACTGTTAGGTGCAACCATTATTGCCATCATCGCCTTTGCGCCTATCGGATTATCGC
AAAATGCCTCAGGAGAATTTTGTCGCTCACTGTTCCAAGTGCTGATGATTTCATTATCTATCAGTTGGATCACCGCAATT
ACCCTCACCCCTTTCTTCTGTCATTTGTTGTTTAAAGATGCACCAAGTGATGATGAGCAAGATCCTTATAAGGGTTGGGT
TTTCAACTTATATCGAGCCAGTTTAACCCTAGCGCTGCGATTTAGAATTGTGAGCATACTGCTGGTTGGTGTGCTGTTAG
TGAGTGCCGTGATTGGCTTTGGTCATATTAAAAATGTGTTTTTTCCCGCATCCAATACGCCAATCTTTTTTGTGGATATT
TGGATGCCTGAAGGCACTGATATTAAAGCAACGGAGCGCTTTGCTGCTGATATTGAACAACAATTACTCAAACAAGCTGA
GCAACAGCATACTGGCCTGACCCACCTAACGACAGTAATAGGCCAAGGGGCGCAGCGTTTTATTCTGCCTTATCAGCCCG
AAAAAGGTTACCCTGCATTCGCCCAGTTGATTGTAGAAATGCAGGATCTTGAGGCGGTGAAAAACTATATGCCGGAACTG
GAGCGTTTTTTAAATCAACGCTTCCCACAGGCACAATATCGCCTAAAAAATATGGAAAATGGTCCATCCCCCGCAGCCAA
AATTGAGGCTCGTTTCTATGGTGATGATCCTGAAGTCCTAAGAGCATTAGGTGCCCAAGTCGAAGCTATTTTCTACGCGG
AGCCAAGCATGGATGGTATACGCCACGACTGGCGTAACCAAGTCCCGTTAGTTCGTCCGCAATTGGAAAATGCCCAAGCA
CGGGAAACGGGGATCAGTAAACAAGATCTCGACAATGCACTGCTGGTTAACTTTAGCGGTAAACAAATTGGTTTATATCG
AGAAACCAGCCACTTGTTGCCGATAGTCGCAAGAGCACCCGCCGAGGAGCGCTTGCAAGCTGATAGTCTCTGGAAACTAC
AAATTTGGAGTAGTGAACACAGCACCTTTGTACCAGCAACCCAAGTTGTCAGTAACTTCAATACCGAATGGGAAAATCCA
CTGGTGATGCGCCGTGACCGTATGCGCATGCTTGCTGTCTTGGCAGATCCTAAATTAGGCAGCGATGAAACGGCGGACTC
TGTGCTACGTAAGGTCAAAGATAAGGTTGAAGCTATCGCCTTACCTGCTGGCTACCACCTCGAATGGGGCGGCGAATATG
AAACCGCAGGTGAAGCGCAAACAGCGGTGTTTAGCTCAATTCCGCTGGGTTACCTTGCCATGTTTTTAATTACAGTATTC
CTATTCAACTCTGTACGTCAGCCATTGGTCATTTGGTTTACTGTACCACTCGCATTGATTGGGGTTTCGGCGGGACTCTT
GTTATTCGATGCGCCCTTCAGCTTTATGGCACTGCTTGGCCTATTGAGCTTATCGGGCATGGTGATCAAAAACGGCATTG
TGTTGGTCGATCAAATCAACCTTGAACTAAGTGAAGGTAAAGCGGCCTATAGTGCATTGTTGGATTCCTGCGTCAGCCGT
GTTCGCCCTGTCATGATGGCGGCGATAACCACAATGCTTGGAATGATCCCCTTAATTTCAGATGCATTTTTTGGTTCGAT
GGCCATAACCATTATCTTTGGCTTAGGCTTCGCTTCTGTGCTGACATTAATTGTCCTGCCAGTCATGTATAGCTTGGCCT
TTAATATCAAACCGACACTAATAGGAGGTCAATCACGTAACTAA

Protein sequence :
MNIAEYSIRHKVISWMFVLLLLIGGGISFTGLGQLEFPEFTIKEALVITAYPGASPEQVEEEVTLPLEDALQQLDAVKHV
TSINSAGLSQIQIEIKDSYDKTSLPQVWDEVRRKVNDTAGQLPPGTGTPQVMDDFGDVYGILFNLSGPDYSNRELSNYAD
YLRRELVLVPGVKKVSVVGSITEQVVIEISQQKLSALGLDQSYIYGLINNQNVVSNAGSLVIGDNRIRIHPTGEFGSIQD
LARLIVSPPGSTELIYLGDIANIAKDYNETPTVLYHNKGEAALSLGISFSSGVNVVEVGQRVSERLAELESQRPIGMNLD
TVYNQSSAVDDTVNGFLINLLESIAIVIAVLLLFMGLRSGLLMGLILLLTILGTFIVMKVLGIELQLISLGALIIALGML
VDNAIVVTEGILIGLRRGKTRLEAAKQIVSQTQWPLLGATIIAIIAFAPIGLSQNASGEFCRSLFQVLMISLSISWITAI
TLTPFFCHLLFKDAPSDDEQDPYKGWVFNLYRASLTLALRFRIVSILLVGVLLVSAVIGFGHIKNVFFPASNTPIFFVDI
WMPEGTDIKATERFAADIEQQLLKQAEQQHTGLTHLTTVIGQGAQRFILPYQPEKGYPAFAQLIVEMQDLEAVKNYMPEL
ERFLNQRFPQAQYRLKNMENGPSPAAKIEARFYGDDPEVLRALGAQVEAIFYAEPSMDGIRHDWRNQVPLVRPQLENAQA
RETGISKQDLDNALLVNFSGKQIGLYRETSHLLPIVARAPAEERLQADSLWKLQIWSSEHSTFVPATQVVSNFNTEWENP
LVMRRDRMRMLAVLADPKLGSDETADSVLRKVKDKVEAIALPAGYHLEWGGEYETAGEAQTAVFSSIPLGYLAMFLITVF
LFNSVRQPLVIWFTVPLALIGVSAGLLLFDAPFSFMALLGLLSLSGMVIKNGIVLVDQINLELSEGKAAYSALLDSCVSR
VRPVMMAAITTMLGMIPLISDAFFGSMAITIIFGLGFASVLTLIVLPVMYSLAFNIKPTLIGGQSRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1355 YP_001217299.1 AcrB/AcrD/AcrF family transporter Not tested VPI-2 Protein 6e-171 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputcn32_0696 YP_001182225.1 acriflavin resistance protein BAC0519 Protein 0.0 55
Sputcn32_0696 YP_001182225.1 acriflavin resistance protein BAC0428 Protein 0.0 54
Sputcn32_0696 YP_001182225.1 acriflavin resistance protein BAC0526 Protein 0.0 53
Sputcn32_0696 YP_001182225.1 acriflavin resistance protein BAC0425 Protein 3e-171 42