Gene Information

Name : Sputcn32_0666 (Sputcn32_0666)
Accession : YP_001182195.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Virulence
Product : response regulator receiver protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 744187 - 744798 bp
Length : 612 bp
Strand : +
Note : PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: she:Shewmr4_0637 two component transcriptional regulator, LuxR family

DNA sequence : 
ATGAGTCTTGAGTTACCTGTGTATTTAATCGATGACGATGACTCAGTGCGTCGTTCTTTGCGTTTTATGCTTGAAAGTTA
TGGCCTTAAGATCATCGATTTTGATAGCGCCGAAGCCTTTTTTACCGCTGTAGACTTAACCCTGCCGGGTTGTGCGCTGG
TCGATGTGCGTATGCCGGGTTTGAGTGGTCAGCAGTTGCACCTTGAATTAGTGGCAAAAAATAGTCCGCTAGCGGTGATT
TATCTCACTGGCCATGGCGATGTGCCAATGGCGGTAGATGCGCTTAAATTAGGTGCGGTGGATTTTTTCCAAAAGCCCGC
CGATGGCGCTAAGTTAGCCGAGGCGGTCGTCAAAGCGCTGGAACATACCAAGGCGCATCATCAAGACAATCAGTATCTTG
AGACTTATCAAGCGCTCACGCCAAGGGAGCGGGAAATACTCAACCTGATTGCCCAAGGACTGAAGAACCAAGAGATCGCC
GATAGTCTCTGTATTGCCATGCGCACGGTTGAGATCCACCGCGCCAATTTGATGAAAGGCATGCAAGTGGGATCGCTGGC
GGAAATGATGCTGATCTACAGTCGGATCGCCGAACGCCTACGTCTCGAATAA

Protein sequence : 
MSLELPVYLIDDDDSVRRSLRFMLESYGLKIIDFDSAEAFFTAVDLTLPGCALVDVRMPGLSGQQLHLELVAKNSPLAVI
YLTGHGDVPMAVDALKLGAVDFFQKPADGAKLAEAVVKALEHTKAHHQDNQYLETYQALTPREREILNLIAQGLKNQEIA
DSLCIAMRTVEIHRANLMKGMQVGSLAEMMLIYSRIAERLRLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 4e-33 45
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 3e-33 45
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 4e-33 45
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 4e-33 45
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 4e-33 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputcn32_0666 YP_001182195.1 response regulator receiver protein VFG0488 Protein 1e-33 45