|
Name : Sputcn32_0616 (Sputcn32_0616) Accession : YP_001182146.1 Strain : Shewanella putrefaciens CN-32 Genome accession: NC_009438 Putative virulence/resistance : Resistance Product : O-succinylhomoserine (thiol)-lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : 2.5.1.48 Position : 677972 - 679135 bp Length : 1164 bp Strand : + Note : KEGG: son:SO4056 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes DNA sequence : ATGGCAGAGCGTCAATTAGCCACACTGGCAGTGCGTCAGGGTATCGAAAGCGATACTCAATATGGTGCCGTTGTGCCACC GATTTATTTGTCGACTAATTACGCCTTCGATGGTCATAACAATCCCCGCGAATTCGATTACAGTCGTTCAGGTAACCCAA CGCGCTGTATTTTAGGCGAAGCGTTAGCCCAATTAGAAAAGGGCGCGACTGGTATAGTAACTTGCACTGGCATGGCGGCC ATCACCTTAGTGACCACCTTACTCGGCCCAGATGATCTCTTGGTTGTGCCCCATGATTGTTACGGTGGTTCTTACCGTTT ATTTACCAATTTAGCGAAGAAAGGCCAGTTTAAGCTGCTGGTGGTCGATCAAACCGACAGTCAAGCGTTAGCCGCAGCCA TAGCGCAGAATCCTAAGATGGTGTGGCTCGAAACCCCATCGAACCCATTATTGCGTGTGGTGGATATCGAAGCCATTGCT AAGGCGAGCCATGATGTCGGCGCGCTGGTGGTGGTCGATAACACCTTTTTATCGCCGATATTGCAACAACCCCTATTGTT AGGTGCGGATATCGTTATCCATTCCACCACTAAATATATCAATGGTCACAGCGATGTGGTCGGCGGCGCTGTGGTCGCCA AAGATGCGCAAATCGGCGAAAGCTTACATTGGTGGTCGAACACTCTAGGCTTAACGGGGTCAGCCTTCGACAGTTATCTG ACCCTGCGCGGCCTACGTACTCTAGCGGTACGCATTCGCGAACATCAAGCCAATGCCCTGCGCATTGTTGAGGTATTAAC CCAAAGCCCTGTGGTGAGCAAAGTCTATTACCCCGGTCTTGCGGATCACCCTGGTCACGCCATTGCGGCCAAGCAGCAAA AAGGCTTTGGCGCTATGCTGAGCTTTGAGCTCAAAGGCGGCGAGACCGAAGTGGTGGCCTTTTTAGGTGCATTAAGTTTA TTTAGCGTGGCAGAAAGTTTAGGTGGCGTCGAAAGTTTGGTGGCAGTGCCCGCCACTATGACCCACAGAGCCATGGAGCC GCAGGCGCGCTTCGAGGCTGGTATTAAAGACACCCTATTGCGTCTATCGGTGGGTATTGAAGATGCCGCCGATTTAGTTG CAGATATTCAAGCAGGATTAGCCGCCGTTGCGGCTTGTCAGTAG Protein sequence : MAERQLATLAVRQGIESDTQYGAVVPPIYLSTNYAFDGHNNPREFDYSRSGNPTRCILGEALAQLEKGATGIVTCTGMAA ITLVTTLLGPDDLLVVPHDCYGGSYRLFTNLAKKGQFKLLVVDQTDSQALAAAIAQNPKMVWLETPSNPLLRVVDIEAIA KASHDVGALVVVDNTFLSPILQQPLLLGADIVIHSTTKYINGHSDVVGGAVVAKDAQIGESLHWWSNTLGLTGSAFDSYL TLRGLRTLAVRIREHQANALRIVEVLTQSPVVSKVYYPGLADHPGHAIAAKQQKGFGAMLSFELKGGETEVVAFLGALSL FSVAESLGGVESLVAVPATMTHRAMEPQARFEAGIKDTLLRLSVGIEDAADLVADIQAGLAAVAACQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 1e-61 | 41 |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 2e-60 | 41 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 4e-52 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sputcn32_0616 | YP_001182146.1 | O-succinylhomoserine (thiol)-lyase | BAC0207 | Protein | 2e-52 | 41 |
