|
Name : Sputcn32_0450 (Sputcn32_0450) Accession : YP_001181981.1 Strain : Shewanella putrefaciens CN-32 Genome accession: NC_009438 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 483607 - 485697 bp Length : 2091 bp Strand : - Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : TTGAGTGCTAACGACTTGCAGCAATTGGATCTTGTTCCGATCACCGACCTCAAAGGCGTCGCCAAAAAGGTCGCGGAGAA ACTCGCAAAGCTCGGCATCACAACAGTACAAGATCTGCTGTTTCACTTACCCCTGCGCTACGAAGACAGAACCCAAATCT ATCCGATTGCCGCCCTCAGCCCTGGTAGTTACGGTACGATAGAAGCAGAAATCCAATCGACACAAATCATCCAAGGCCGC AAGCGCATGCTGGTCTGCAATGTGCGCGACGATACGGGCAGCTTAAGCCTGCGCTTCTTTAACTTTTCCGTTGCTCAGCG TAATGCCATGCAAAATGGTTTGATGATCCGCGCCTATGGTGAAGTGCGCCGTGGTAGTCATCAAGCTGAGATAGTGCATC CAGAATATAAAGTGGTGTATCCCGATGAAGATGTTCACCTGAGTGATACCCTAACGCCGATTTATCCCACAACTGAAGGC TTAAAACAGGCGAGTTGGCTAAAGCTGACGGAGCAAGCCTTGGTATTGCTGAAAGAGGGTGGCTTAACTGAGCTGCTGCC ACCGCAATTGCAACCTAACAACATCAGCCTTAAACAAGCACTGCAGACGTTACATCGCCCTCCAGCGGGGATCTCTCAGT TCGATTTAGAGCTAGGTCAACACCCTGCCCAGCAACGACTCGTGCAGGAAGAATTACTCGCCCATAATCTCAGCATGTTG CGCCTACGGCAGCGCAGTAATTTAGACGCTGCCGTCACCATGCAGGCCACGGGGCAGTTGCTCAATCCCTTCCTCGCGGC TCTGCCCTTTAAGCCGACTGGCGCCCAGCAAAGAGTCGTGGCTAATATAGGCAAAGATTTAGAAAAACCGCACCCTATGA TGCGCTTAGTGCAAGGGGATGTTGGCTCAGGTAAAACCTTAGTCGCGGCGATGGCGGCATTACAAGCGATTGAAAACGGT TATCAAGTTGCCATGATGGCACCAACCGAATTATTAGCAGAGCAACATGCAACTAACTTTGCCGCTTGGTTTGAGCCACT CGGACTTAAGGTGGGTTGGCTTGCAGGGAAACTGAAAGGCAAGGCCAGAACCCAATCCCTTGCGGATATTGAATCTGGCG CAGCCCAGATGGTGATTGGCACCCATGCCATCTTCCAGCAGCATGTGGTCTTTAACAAACTCGCATTAATTATTATCGAT GAGCAGCACAGATTCGGCGTACACCAACGCTTAGGTCTGCGGGAAAAAGGCATGAGCCAAGGCTTTCATCCACATCAGTT AATCATGACTGCAACCCCCATTCCACGCACATTGGCGATGACGGCCTATGCAGATCTCGACACCTCCATTATCGATGAAC TGCCACCGGGGCGTACACCCGTCACCACAGTGGCAATTGCCGATTCCCGCCGTAACGAAGTGCTTGAACGGGTGCGCAAC GCCGTCATCACCGACCAACGTCAAGCCTACTGGGTGTGTACTCTGATTGAAGAGTCTGAAGTGCTCGAATGCCAAGCCGC CGAAGACACGGCCGAAGAACTGCGTCTCGCACTGCCAGATCTCAATATCGGCCTAGTGCATGGCAGATTAAAAAGTGCCG AGAAACAGCAAATCATGGCCGACTTTAAGGCAGGCATGATTCATCTACTGGTAGCGACAACCGTGATTGAAGTCGGCGTC GACGTGCCCAATGCTAGCCTAATGATCATCGAAAACCCTGAACGTTTAGGTCTAGCACAACTGCATCAACTGCGCGGACG AGTCGGTCGAGGCGCCATCGCAAGCCATTGTGTGTTACTCTACAAGGCGCCGTTGAGCCATACCGCCACCCAACGACTGA GTGTCCTCAGACAAAGCAATGATGGTTTCATCATAGCGCAGAAAGATTTAGAAATTCGTGGCCCGGGTGAAGTGCTTGGC ACTAAACAGACGGGGCTCGCCGAGCTCAAAATTGCCGATCTGGTGCGCGATCAAGCTTTGATCCCACACATTCAGAAATT AGCGAGCCATGTAATGGCGCAAGCTCCCGAAAAAGTCGATGCAATTATTTTACGTTGGCTCGGGCACAGACAGCACTATG TGCAGGCTTAA Protein sequence : MSANDLQQLDLVPITDLKGVAKKVAEKLAKLGITTVQDLLFHLPLRYEDRTQIYPIAALSPGSYGTIEAEIQSTQIIQGR KRMLVCNVRDDTGSLSLRFFNFSVAQRNAMQNGLMIRAYGEVRRGSHQAEIVHPEYKVVYPDEDVHLSDTLTPIYPTTEG LKQASWLKLTEQALVLLKEGGLTELLPPQLQPNNISLKQALQTLHRPPAGISQFDLELGQHPAQQRLVQEELLAHNLSML RLRQRSNLDAAVTMQATGQLLNPFLAALPFKPTGAQQRVVANIGKDLEKPHPMMRLVQGDVGSGKTLVAAMAALQAIENG YQVAMMAPTELLAEQHATNFAAWFEPLGLKVGWLAGKLKGKARTQSLADIESGAAQMVIGTHAIFQQHVVFNKLALIIID EQHRFGVHQRLGLREKGMSQGFHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAIADSRRNEVLERVRN AVITDQRQAYWVCTLIEESEVLECQAAEDTAEELRLALPDLNIGLVHGRLKSAEKQQIMADFKAGMIHLLVATTVIEVGV DVPNASLMIIENPERLGLAQLHQLRGRVGRGAIASHCVLLYKAPLSHTATQRLSVLRQSNDGFIIAQKDLEIRGPGEVLG TKQTGLAELKIADLVRDQALIPHIQKLASHVMAQAPEKVDAIILRWLGHRQHYVQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 3e-101 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sputcn32_0450 | YP_001181981.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 0.0 | 59 |
