Gene Information

Name : glnA (Sputcn32_0412)
Accession : YP_001181943.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 444209 - 445618 bp
Length : 1410 bp
Strand : -
Note : forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltra

DNA sequence :
ATGTCAGTTGAATCAGTTTTAAAGCAACTTGAAGAATTAGAAGTTAAGTTTGTTGATTTACGTTTTACCGACACCAAAGG
TAAAGAGCAGCATGTATCTATTCCTACTCATCAAGTAGATGCTGACTTCTTCGAAGACGGTAAAATGTTTGACGGCTCTT
CAATTGCAGGCTGGAAAGGCATTAACGAATCAGACATGGTACTGATGCCAGATCCAACCACTTTTGTACTGGATCCCTTC
ACCGAAGAAACCACAGCCTTGATCCGCTGTGACATTCTAGAGCCAGGCACAATGACAGGTTACGACCGTGATCCACGTTC
TATCGCTAAAAAAGCGGAAGAATACCTACGCTCTACCGGTATTGCTGACACTGTATTGATTGGCCCAGAACCAGAATTCT
TCCTCTTTGACGATGTCCGTTTCGGTACTGACATGTCAGGTTGTTTCGTTAAGATCGACGCTAAAGAAGCGGCTTGGAAC
TCAGGTACAAGCTACGAAGGTGGCAACACAGGTCACCGTCCATTCGTTAAAGGCGGTTATTTCCCAGTTGCACCTGTTGA
CTCATCACAGGACTTACGTAGCGCTATGTGTTTAGTGCTTGAAGAAATGGGCCAAGTGGTTGAAGCGCATCACCACGAAG
TGGCGACTGCGGGCCAAAACGAAATCGCCACTCGCTTCAACACTCTGACTAAGAAAGCGGACGAAATCCAAATTCTGAAG
TACGTAGTTCACAACATGGCACACGCCTACGGCAAGACTGCGACTTTCATGCCTAAGCCAATCGTTGGCGACAACGGTAG
CGGCATGCACGTTCACCAATCTTTATCTAAAGATGGCGTTAACCTGTTCGCAGGTGACAAATACGCTGGCCTGAGTGAAA
CCGCTCTGTACTACATTGGCGGTATCATCAAGCACGCTCGCGCGCTGAACGCTTTCACTAACCCGAGCACTAACTCTTAC
AAGCGTTTAGTGCCACATTTTGAAGCACCTGTTATGCTGGCTTACTCTGCCCGTAACCGCTCTGCATCAATCCGTATTCC
AGTGGTACCAAGCCCTAAAGGCCGCCGTATCGAAGCACGCTTCCCAGATCCACATGCAAACCCATACTTAGGTTTTGCTG
CACTGCTGATGGCAGGTCTTGACGGTATCCAAAACAAGATCCACCCAGGCGAAGCGATGGACAAAGACTTGTACGATCTG
CCAGCCGAAGAAGCGGCTGAAATCCCACAAGTGGCCACTTCATTAGAAAACGCCCTTGAAAACCTGCAAGCAGACCATGA
GTTCTTAACCCGTGGCGGCGTATTCAGCGAAGATTTTATCCAGTCTTACATTGCACTGAAAACTGCTGAAGCTGAGCGTG
TAGCACGCACAACTCACCCATTAGAGTTTGAAATGTACTACAGTCTGTAA

Protein sequence :
MSVESVLKQLEELEVKFVDLRFTDTKGKEQHVSIPTHQVDADFFEDGKMFDGSSIAGWKGINESDMVLMPDPTTFVLDPF
TEETTALIRCDILEPGTMTGYDRDPRSIAKKAEEYLRSTGIADTVLIGPEPEFFLFDDVRFGTDMSGCFVKIDAKEAAWN
SGTSYEGGNTGHRPFVKGGYFPVAPVDSSQDLRSAMCLVLEEMGQVVEAHHHEVATAGQNEIATRFNTLTKKADEIQILK
YVVHNMAHAYGKTATFMPKPIVGDNGSGMHVHQSLSKDGVNLFAGDKYAGLSETALYYIGGIIKHARALNAFTNPSTNSY
KRLVPHFEAPVMLAYSARNRSASIRIPVVPSPKGRRIEARFPDPHANPYLGFAALLMAGLDGIQNKIHPGEAMDKDLYDL
PAEEAAEIPQVATSLENALENLQADHEFLTRGGVFSEDFIQSYIALKTAEAERVARTTHPLEFEMYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 6e-101 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_001181943.1 glutamine synthetase VFG1399 Protein 4e-110 52