Gene Information

Name : Sputcn32_4000 (Sputcn32_4000)
Accession : YP_001185502.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 4653762 - 4654931 bp
Length : 1170 bp
Strand : -
Note : PFAM: phage integrase family protein; KEGG: pgi:PG0874 mobilizable transposon, int protein

DNA sequence :
ATGAAAATCAATATACAAAAACGAGAACCAGATAAGAATGGCCTGCGCCCCATCAGGCTTGTGTACTATTACGGCTCAAA
GACCTCGGAAGACGGTTCAAGGGCTCAAAAGCGCTCTTACGAACCGCTGAATCTATTCCTCTATAACAAGCCAAAAAACG
CAGTTGAGCGCGAGTACAATAAGACTACACTGCAAAAAGCCGAAGCTATTCGTGCCAAACGCCTGCTAGAAATGGAATCT
GCCAAACATGGCTTGGATGACAGCACAAAACTTAATGCCAGCTTCTTTGACTACTTCGATCAAGTAACAGCAAGTAAAGC
ATCCGGTAGTAAATCCAACTACTCAATTTGGGTTTCAGCGGGCATCCATCTCCACCGTTATCACCGCCACGCAGAACTCA
CTTTTGAACAGATAGATAAATACTTTTTGGAAGGGTTCCGCCATTACCTACAGCATGAGGCAATAACAAAATCAGATACC
GGCCTCTCCAGAAATACCGCCTGTAGCTACTTCAATAAAATCCGGGCAGCACTCAACCAAGCACAACGAGACCGAATCAT
CAGAGATAACCCTGTTGAACAAGTCAAATCCATCAAAGCAGAAAGGACACAGCGCACTTATCTCACTCTGGATGAGGTAA
AGGCCCTTACCAAGGCAGAATGCCGTTACGATGTACTACGAAGAGCATTTCTGTTCTCCTGCACGACAGGACTACGCTGG
TCAGACATTCATAAACTGGTGTGGGGTGAAATTGAACTATTTTCTCAAGGGCACTACCGAATAATCTTTTCCCAGATAAA
GCTCAAAAACTCAGGCAATGGCCTGCAATATCTCGACTTACCGGATTCTGCGGTGCGTCTACTCAACTTGGAGAACAAGG
GAAAACCGACTGAACGGGTTTTTAAGGGTTTACGTTACGACAGTTACAGCAACGTCGCGCTAGTGCAGTGGGCCATACGT
GCCGGAATAACCAAACACGTGACCTTTCATGCTGGCCGACACACCTTTGCAGTAAACCAACTTGCCCGTGGCCTGGACAT
CTATTCCCTTTCCAGATTGCTTGGCCACAGCGAACTCAGAACGACAGAAATCTACGCAGATATTCTGGAAACCCGCCGCA
CAGAGGCAATGCGGACTTTTCCGGATATTTTCGATGAGTCTTCAGACTGA

Protein sequence :
MKINIQKREPDKNGLRPIRLVYYYGSKTSEDGSRAQKRSYEPLNLFLYNKPKNAVEREYNKTTLQKAEAIRAKRLLEMES
AKHGLDDSTKLNASFFDYFDQVTASKASGSKSNYSIWVSAGIHLHRYHRHAELTFEQIDKYFLEGFRHYLQHEAITKSDT
GLSRNTACSYFNKIRAALNQAQRDRIIRDNPVEQVKSIKAERTQRTYLTLDEVKALTKAECRYDVLRRAFLFSCTTGLRW
SDIHKLVWGEIELFSQGHYRIIFSQIKLKNSGNGLQYLDLPDSAVRLLNLENKGKPTERVFKGLRYDSYSNVALVQWAIR
AGITKHVTFHAGRHTFAVNQLARGLDIYSLSRLLGHSELRTTEIYADILETRRTEAMRTFPDIFDESSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int ACS32045.1 integrase Not tested SGI2 Protein 1e-131 67
int AGF34959.1 integrase Not tested SGI1 Protein 1e-131 67
int AGF34999.1 integrase Not tested SGI1 Protein 1e-131 67
int AGF35038.1 integrase Not tested SGI1 Protein 1e-131 67
int AGK06906.1 integrase Not tested SGI1 Protein 1e-131 67
int AGK06943.1 integrase Not tested SGI1 Protein 1e-131 67
int AGK06989.1 integrase Not tested SGI1 Protein 1e-131 67
int AAG03003.1 integrase Not tested SGI1 Protein 1e-131 67
int AGK07047.1 integrase Not tested SGI1 Protein 1e-131 67
int ACX47954.1 integrase Not tested SGI1 Protein 1e-131 67