Gene Information

Name : Sputcn32_3839 (Sputcn32_3839)
Accession : YP_001185344.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Unknown
Product : type III restriction enzyme, res subunit
Function : -
COG functional category : K : Transcription
COG ID : COG1061
EC number : -
Position : 4452307 - 4453722 bp
Length : 1416 bp
Strand : +
Note : PFAM: helicase domain protein; type III restriction enzyme, res subunit; KEGG: sfr:Sfri_3418 type III restriction enzyme, res subunit

DNA sequence :
ATGCAACTTAGACAATGGCAATCTGAGTGCGTCAAACGCGCTCTAAGGCACTTTCATGGTGCTCACAAACATTTCCTTTG
CTTAGCAACACCTGGTGCAGGCAAATCAACTATGGCCGCCGAAGTTGCTGCGAAACTATTTGAGGATGACTTAATCGACT
TTGTACTGTGCTTCTCCCCGTCAGTAAATATATCTCAAGGGATGAAACAGACCTTTTCAAGTCGTCTAAGCTGTCGGTTT
GATGGCGTGATCGGTTCAGTCGGTTGTTCTTATACTTACCAGGGGATGTTGGCTTTTAAAGAAGATTTCTGGCAATTACT
GAGAAGGAATAGAGTTCTCGTTGTCTTTGATGAGATCCATCATTGTGCAGGGAGATCTCTTGAAGATGCAAACGCATGGG
GGGAAGAAATCCTACTCAACATACAGGCCCAAGCGCAGTACACCCTAGCGTTAACGGGCACGCCTTGGCGCTCTGACCAA
GCACCCATTGTCTTATCTAGATACATAGATCCAGATAACCAAATTCAATGTGACTATGTCTATGGCCTTAAGGAAGCCGT
TGCAGAAAGTGTATGCCGTAGCCCTCACATTGTGCTAATCGATAACGACAAAATTTCAGTTACAGACGAAGAAAACGAAA
CAAAGACTTATCGCTCTTTGGATGAGCTACTGAAAAGCTCATCAATCTCTTATCAGTCTATCATCGAGAATCATGAGGCG
ATTCAATATATCTTAACGTTAGCAACAAATAAGTTAAAAGCCATAAAACAGTCCAACCCTAATGCAGCCGGACTTATTGT
CGCATCATCTGTATCACACGCAGCAGATATCTTAAACACACTCAAAAATGAGTTTAATGAAACAGCTCAGATAGTTACCT
ACAAAGAGGATGATCCATCTGCCAAGATAAATGAATTCAGAAACAGCACAACTAACTGGATCGTGAGTGTCGGCATGATA
AGTGAGGGGACTGATATCCCTCGCCTGCAGGTTTGTTGCCACCTTAGTCGAGTAAAAACTGAGCTTTACTTTAGACAGGT
TTTAGGTCGTATTTTACGAACTAATGATTCGCTTAATCAGCAAGCTTGGCTATACACCTTTGCTGAACCAAAACTTGTAG
AATTTGCCAGTCGTATAGCAGAAGAAATACCTGATATCCCAGTGATATTTAGCGAGCCAATCGAGATAAATCTCAAACAA
GAGTTACCGGAGTTCCATGATATGTCAGTGAAAACGCTGCCACCGACTAACAGCAATATTCTCAATATTGGCAGGCAATA
CCTCGATAAACAGACAAAATCTTATTCTGCAGAGATTTTCTTGGGGGAAAATTTTGGCACCTCAACATCACTATCATTCG
AACTCTTAGGTGGTTTTCGAGAAAAAGTTGTCTCAACTTTTAACTCACCTTTTTAA

Protein sequence :
MQLRQWQSECVKRALRHFHGAHKHFLCLATPGAGKSTMAAEVAAKLFEDDLIDFVLCFSPSVNISQGMKQTFSSRLSCRF
DGVIGSVGCSYTYQGMLAFKEDFWQLLRRNRVLVVFDEIHHCAGRSLEDANAWGEEILLNIQAQAQYTLALTGTPWRSDQ
APIVLSRYIDPDNQIQCDYVYGLKEAVAESVCRSPHIVLIDNDKISVTDEENETKTYRSLDELLKSSSISYQSIIENHEA
IQYILTLATNKLKAIKQSNPNAAGLIVASSVSHAADILNTLKNEFNETAQIVTYKEDDPSAKINEFRNSTTNWIVSVGMI
SEGTDIPRLQVCCHLSRVKTELYFRQVLGRILRTNDSLNQQAWLYTFAEPKLVEFASRIAEEIPDIPVIFSEPIEINLKQ
ELPEFHDMSVKTLPPTNSNILNIGRQYLDKQTKSYSAEIFLGENFGTSTSLSFELLGGFREKVVSTFNSPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13515.1 type III restriction enzyme Not tested PAGI-7 Protein 8e-105 45