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Name : Sputcn32_3567 (Sputcn32_3567) Accession : YP_001185075.1 Strain : Shewanella putrefaciens CN-32 Genome accession: NC_009438 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 4145305 - 4147416 bp Length : 2112 bp Strand : - Note : TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: son:SO0166 general secretion pathway protein D DNA sequence : ATGAATAATAAAAGGATTCGACGCAAACTGATTGCTGGAGTTGTGGCGGGCGCTGCCATGTTTACCTCCCAATTTGTTTG GTCAGAACAGTATGCGGCCAACTTCAAGGGCACTGATATTCAAGAGTTTATCAACATTGTTGGTAAAAATTTGAATAAGA CCATCATTGTTGACCCAACGATCCGTGGCAAAATTAACGTACGCAGTTATGACCTGCTGAATGACGAACAGTATTACCAG TTCTTCCTTAACGTGTTGCAAGTTTATGGTTATGCCATTGTCGAGATGGAAAATGGCGTGATTAAGGTTGTTAAAGACAA AAGCGCCCAGACGGGGGCAATCCGTGTCGCGAACGATAATGATCCCGGCATTGGCGATGAAATGGTTACCCGTATTGTGG CCTTGTATAACACTGAGGCTAAGCAACTCGCTCCCCTGTTACGCCAGCTAAATGATAACGCCGGTGGTGGCAACGTCGTC AACTACGATCCTTCCAACGTACTTATGCTGACGGGCCGAGCCTCTGTGGTTAACAAGCTGGTGGAAATTATCCGCCGTGT TGATAAACAAGGGGATACATCGGTACAAGTGGTGCCGCTAGAGTACGCATCAGCGGGTGAAATGGTGCGAATTATCGATA CCCTTTACCGTGCAAGCGCAAACCAAGCGCAGTTACCCGGTCAAGCACCCAAAGTGGTGGCCGATGAACGTATTAACGCT GTCATCGTTAGTGGTGATGAAAAGAGCCGTCAGCGGGTGGTTGAGCTCATTCATCGTCTCGATGCGGAGCAAGCCAGCAC AGGAAACACTAAGGTACGTTATTTACGCTACGCCAAAGCGGAAGATTTGGTTGAAGTGTTAACGGGTTTTGCCCAAAAAC TGGAAGGTGAAAAAGATCCAAGTGCGCAGGCGGGTGCGAAACGTCGTAATGAAATCAACATTATGGCTCACACAGATACA AACGCTTTAGTGATCAGCGCCGAGCCGGATCAAATGCGTACTATTGAGAGCGTGATTAACCAGCTCGATATTCGCCGTGC TCAAGTATTGGTCGAAGCCATTATCGTCGAAGTTGCTGAGGGCGATAATGTCGGTTTTGGCGTGCAATGGGCTGCTAAAG CAGGTGGTGGTACTCAGTTTAATAACTTAGGCCCAACCATAGGTGAGATTGGCGCAGGGATTTGGCAAGCACAGGATAAA GAAGGTACTTATATTACGAACCCCAGCACGGGTGAGGTTATAGGTAAAAACCCTGACACTCAAGGTGATGTCACCTTACT TGCCCAAGCTTTAGGTAAGGTCAATGGTATGGCTTGGGGTGTGGCCATGGGGGACTTTGGTGCCTTAATTCAAGCCGTGT CGAGTGATACTAACTCTAACGTATTGGCAACACCTTCGATTACCACCTTAGATAACCAAGAAGCCTCATTCATCGTGGGT GATGAAGTGCCTATTTTGACAGGGTCTACCGCCAGTTCAAATAACAGCAACCCATTCCAAACCGTTGAACGTAAAGAGGT TGGGGTTAAGTTGAAAGTGGTGCCACAAATCAACGAGGGCAATGCGGTTAAGCTGGCGATTGAACAAGAAGTGTCAGGCG TTAACGGTAACACGGGTGTGGATATTTCCTTTGCGACTCGCCGTCTAACCACCACTGTTATGGCTGACTCTGGGCAAATT GTGGTACTCGGGGGTTTGATTAACGAAGAAGTGCAGGAAAGTGTGCAAAAAGTACCTTTCCTTGGTGATATACCCGTGCT TGGGCATTTATTCAAATCTTCCTCCAGTAAAAAGACGAAGAAAAACCTGATGATCTTTATCAAGCCAACCATTATTCGTG ATGGTATGACAATGGAAGGGATTGCTGGGCGTAAATACAACTATTTCAGAGCGTTACAACTTGAGCAACAAAAGCGTGGT GTTAACTTAATGCCGGATACTCAAGTCCCTGTATTGGATGAATGGAATCAATCTGAGTATCTACCGCCGGAAGTGAACGA TATTTTAGAGCGTTACAAAGATGGCAGAGGCCTAGACACCCAGATGCGTAAAACGGATTCAACGCTCAAAACGCTGGATG AAAACAAAAATAAAGATAAAACCAATGAGTGA Protein sequence : MNNKRIRRKLIAGVVAGAAMFTSQFVWSEQYAANFKGTDIQEFINIVGKNLNKTIIVDPTIRGKINVRSYDLLNDEQYYQ FFLNVLQVYGYAIVEMENGVIKVVKDKSAQTGAIRVANDNDPGIGDEMVTRIVALYNTEAKQLAPLLRQLNDNAGGGNVV NYDPSNVLMLTGRASVVNKLVEIIRRVDKQGDTSVQVVPLEYASAGEMVRIIDTLYRASANQAQLPGQAPKVVADERINA VIVSGDEKSRQRVVELIHRLDAEQASTGNTKVRYLRYAKAEDLVEVLTGFAQKLEGEKDPSAQAGAKRRNEINIMAHTDT NALVISAEPDQMRTIESVINQLDIRRAQVLVEAIIVEVAEGDNVGFGVQWAAKAGGGTQFNNLGPTIGEIGAGIWQAQDK EGTYITNPSTGEVIGKNPDTQGDVTLLAQALGKVNGMAWGVAMGDFGALIQAVSSDTNSNVLATPSITTLDNQEASFIVG DEVPILTGSTASSNNSNPFQTVERKEVGVKLKVVPQINEGNAVKLAIEQEVSGVNGNTGVDISFATRRLTTTVMADSGQI VVLGGLINEEVQESVQKVPFLGDIPVLGHLFKSSSSKKTKKNLMIFIKPTIIRDGMTMEGIAGRKYNYFRALQLEQQKRG VNLMPDTQVPVLDEWNQSEYLPPEVNDILERYKDGRGLDTQMRKTDSTLKTLDENKNKDKTNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-146 | 53 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 1e-154 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sputcn32_3567 | YP_001185075.1 | general secretion pathway protein D | VFG2047 | Protein | 6e-145 | 53 |
