Gene Information

Name : Sputcn32_3519 (Sputcn32_3519)
Accession : YP_001185027.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4091846 - 4092220 bp
Length : 375 bp
Strand : -
Note : PFAM: YagBYeeUYfjZ family protein; KEGG: son:SO1453 hypothetical protein

DNA sequence :
ATGACAACGCTAAAACTTTTCGATATTGAGCACGCCTGGGGCTTACCCCGTAAAGTGTCTCCCCGCTTTGGTGCAAGGCT
GATTTTACGTGGTCTGCACTTGGATTATCTCAATGACCGTGCAAGCTTTGTCGGTGAATTTCCACCAGCAATTAAACAAC
AATTTATCGAGGCCTTTCCCGCCATGGTTAAACAGCTTGAACGGCTGGTGGCCACCGGCGAGATTGATGCCACTGAGCAG
CACTGCGTCACCATTGAGCACGTTGGCTTTACCTGTGAGGCAGACACCTTAGGCAGCCACGGCTATTTGTATATTGCGAT
TTATCAAACCGAAGCTAAACCACTAACCACCAGCAACCAAGCCCTGACTCGATAA

Protein sequence :
MTTLKLFDIEHAWGLPRKVSPRFGARLILRGLHLDYLNDRASFVGEFPPAIKQQFIEAFPAMVKQLERLVATGEIDATEQ
HCVTIEHVGFTCEADTLGSHGYLYIAIYQTEAKPLTTSNQALTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 4e-19 52
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 8e-20 52
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 9e-20 51
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 9e-20 51
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 6e-20 51
Z1220 NP_286755.1 structural protein Not tested TAI Protein 2e-19 50
Z1658 NP_287161.1 structural protein Not tested TAI Protein 2e-19 50
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 1e-18 50
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 8e-19 50
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 9e-20 50
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-20 50
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 1e-18 49
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 3e-18 49
unnamed AAL08477.1 unknown Not tested SRL Protein 6e-18 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputcn32_3519 YP_001185027.1 hypothetical protein VFG0662 Protein 2e-20 51
Sputcn32_3519 YP_001185027.1 hypothetical protein VFG1619 Protein 6e-19 50
Sputcn32_3519 YP_001185027.1 hypothetical protein VFG1681 Protein 3e-19 50
Sputcn32_3519 YP_001185027.1 hypothetical protein VFG1068 Protein 2e-18 48