Gene Information

Name : Sputcn32_3081 (Sputcn32_3081)
Accession : YP_001184593.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 3578187 - 3580205 bp
Length : 2019 bp
Strand : -
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: xcb:XC_3531 potassium-transporting ATPase B chain

DNA sequence :
ATGCATAAACCTGCTCAAATATTAGATAGCGCTGGCGTGAAGCAAGCTGCCTTTGGTGCTGTAAAGAAAATGTCCTTAGT
GAGTATGGCTGGCAATCCTGTGATGTTCGTGGTGCTGGTGGGCGCTTTACTCGCCGCATTGATCACAGGACAAAAGTTCT
TCAATGGCGAGGCTGTTACTTTTGAGTTAGCCACGACCCTTATTCTTTTGCTTACCGTGTGGTTTTCTAACTTTGCGGAA
TCCGTGGCAGAGGCCAGGGGGCGCGGACAAGCGGCTAGCTTAAAGTCGGCGAAAGAGGCCTTGCAGGCTCGGCGCATACG
CCACGGTGAGTTGGAATCAGTATCCGCAACTTTGCTTGTCAAAGGCGATAAGGTGAAGGTTTTACAGGGGGATTATATTC
CTGCCGATGGTGAGATCATCGAAGGGATAGCCACTATCAATGAATCTGCTATTACCGGTGAATCTGCGGCTGTGCTGCGT
GAAGCAGGCACAGATCATTCCGGTGTGATTGGCGGCACTAAGGTACTTACGGGTGAAATTACCGTGCTGGTTGCCAATGA
TCCTGGGAATAGCTTTTTAGATCGTATGATAGGGCTGGTCGAAGGGGCGAAGCGTCAGAAGACACCGAACGAAACGGCGT
TGACTGTGCTACTTGCATCATTGACTGCGGTTTTCCTTATCGTGGTGATGACTTTGCCACCCATGGCGGGTTTCGTCGGT
GCAAGCCTTGATTACACTATGTTAATTGCGCTGTTAGTGTGTTTGATCCCAACGACGATTGGTGGCTTGTTACCTGCCAT
TGGTATTGCCGGCATGAACCGTGCCTTAGCCGCCAATGTGGTCGCTAAATCGGGTAAAGCCGTGGAAGTTGCGGGGGATA
TCGATACGTTACTGCTGGATAAAACTGGCACTATCACTTTCGGTGATCGCCAAGCGACCGCGTTTCTACCCGTGAAAGGC
ATTGCAGCTGAGATGTTGCGTGATGCGGCGGTACTTTCCTCCCTCGATGACCCCACCCCTGAAGGGAAATCTGTACTCAA
ATTGGCCATAGATTTTGGGGCGGTATTGCCCGTCAAACCTACGGATGCAACTTTTATCCCTTTTACGCCGGAGACTCGGG
TTTCTGGGGTGATTTTAACCGATGGTATTCAAGGCATTAAAGGCGCGAGCGATGCGATGCAGTTTTGGGCGCAGCAGCAT
CAAATTCACTGGCCTGAATCTGTTAACGCGCTTATCCGCAAAGTGGCTTTGCAAGGGGGCACTCCTTTAGTCGTTGCCAG
TGGCACGCACATTTTAGGGGTTATAGCCTTAAGTGACGTGATTAAGCCAGGCGTTGCGGAGCGGTTTGCCAGTTTAAGAG
CGCTCGGTGTACGGACCATCATGGTGACAGGGGATAATCCGCTAACGGCTGGCGTGATTGCCGCCGAGGCTGGGGTCGAT
GATTTTGTCGCTGAAGCTAAACCTGAGGATAAACTTGCCCTTATTCGTGCAGAGCAGGCCAAAGGTCGATTAGTGGCTAT
GGTGGGGGATGGCACTAACGATGCGCCGGCATTAGCGCAGGCCGATGTAGGTCTTGCAATGAACTCAGGTACCCAAGCCG
CTAAAGAAGCTGGCAATATGGTGGATTTGGATTCTGATCCCACTAAATTACTGGCTATCGTTGAAGTTGGAAAACAATTG
CTGATCACCCGCGGCGCCTTGACTACATTCTCCCTCTCCAATGATGTGGCTAAGTATTTTGCCATTATTCCAGCGGTATT
TGCGGGGGCTTTGCCTGCGATTGGAGCACTGGATCTGATGCAGCTTCACAGCCCAACCTCAGCCGTACTCGCAGCGCTCG
TATTTAATGCTCTTATCATTCCCGCCTTAATTCCATTGGCATTAAAAGGCATCAAGCTCAGACCCATAAGTGCCGAAAAA
TTACTGCGAAATAACATGCTGATTTATGGCTTAGGTGGGGTGATTTTGCCCTTTGTCGGCATTAAAGCGCTCGACTCAAT
CATTGCCCTTATGCTCTAG

Protein sequence :
MHKPAQILDSAGVKQAAFGAVKKMSLVSMAGNPVMFVVLVGALLAALITGQKFFNGEAVTFELATTLILLLTVWFSNFAE
SVAEARGRGQAASLKSAKEALQARRIRHGELESVSATLLVKGDKVKVLQGDYIPADGEIIEGIATINESAITGESAAVLR
EAGTDHSGVIGGTKVLTGEITVLVANDPGNSFLDRMIGLVEGAKRQKTPNETALTVLLASLTAVFLIVVMTLPPMAGFVG
ASLDYTMLIALLVCLIPTTIGGLLPAIGIAGMNRALAANVVAKSGKAVEVAGDIDTLLLDKTGTITFGDRQATAFLPVKG
IAAEMLRDAAVLSSLDDPTPEGKSVLKLAIDFGAVLPVKPTDATFIPFTPETRVSGVILTDGIQGIKGASDAMQFWAQQH
QIHWPESVNALIRKVALQGGTPLVVASGTHILGVIALSDVIKPGVAERFASLRALGVRTIMVTGDNPLTAGVIAAEAGVD
DFVAEAKPEDKLALIRAEQAKGRLVAMVGDGTNDAPALAQADVGLAMNSGTQAAKEAGNMVDLDSDPTKLLAIVEVGKQL
LITRGALTTFSLSNDVAKYFAIIPAVFAGALPAIGALDLMQLHSPTSAVLAALVFNALIIPALIPLALKGIKLRPISAEK
LLRNNMLIYGLGGVILPFVGIKALDSIIALML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 6e-142 55
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 8e-142 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-141 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-141 55
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-141 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-141 55
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-129 53
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 2e-129 53