Gene Information

Name : cvrA; nhaP2; ycgO (Sputcn32_3071)
Accession : YP_001184583.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Unknown
Product : potassium/proton antiporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG3263
EC number : -
Position : 3563511 - 3565235 bp
Length : 1725 bp
Strand : -
Note : the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli

DNA sequence :
GTGGATGCAGATTCCATCAATAGTTTTTTTCTGATCGGTGCCTTGCTTGCAGCAGTGAGTGTTTTGCTTAGTCCTATGTC
TTCCCGTTTAGGCATTCCAATTTTATTGATTTTCCTTGCTGTAGGTATTTTGGCTGGTGAAGATGGTCTTGGTGGTATCC
AATTTGATGATTACTCCACAGCTTATTTAGTCAGTAACTTAGCCTTAGCGATTATTTTGCTCGACGGCGGTATGCGCACG
CGCGTAGCCAGTTTTAGGGTGGCGCTATGGCCTGCATTATCCTTGGCGACTTTTGGCGTTGCGATTACCACCAGTATTAC
TGGCTTGATGGCCGCATGGTTGTTTGATTTGCATTGGCTGCAGGGGTTACTGGTTGGGGCTATTGTGGGCTCGACTGATG
CGGCAGCGGTATTTTCCTTACTTAAAGGACGAAGTCTTAATGAGCGGGTTGGGGCAACCTTGGAAATTGAGTCCGGTAGT
AACGATCCTATGGCGGTATTTTTAACCGTCACATTAATTGCTATTTTGGCTAATGTTGATACTGAGCTTTCGGTTAGTTT
TATGCTGGTAAGCTTTATTAAACAGTTTGGTTTGGGAATTTGTTTAGGTTTAGGCGGTGGTTGGCTGCTATGGAAACTGG
TTAATTTAAGTAAGCTTGCAGAGGGGCTTTACTCAATTTTAGTCTTAAGTGGCGGACTGATTATCTATGCTGTATCTAAC
AAGTTGGGTGGAAGTGGCATTTTATCCATTTACTTAGTCGGATTATTCCTCGGTAATAAACCCACTCGTGGTCGTCATTC
TATTTTAAACGTACTCGATGGTATGACTTGGGTCAGCCAAATCGGTATGTTCCTTGTCTTAGGCTTGCTACTTACCCCTT
CTGATTTATTTGATATTTTGCTGCCTGGTTTTGCCTTGGCATTTGGGATGATCTTATTCGCCCGTCCTCTGGCTGTGTGG
CTGAGCTTATTGCCCTTTAAAAGCTTTAGTAGCCGGGATCGTTGGTTTATTTCTTGGGTGGGGTTACGCGGCGCTGTACC
GATCATCTTAGCAGTATTTCCTATGATGGCGGGCCTGCCAGGGGCTCAGTTATATTTCAACTTAGCTTTCTTCGTCGTGC
TAGTCTCGCTGCTGATCCAAGGAGCTTCGTTAACCACGGCAGCGCGCTTGGCAAAGGTGGAACTGCCCCCAAAGCCGCTC
CCCATTTCACGCTCGGGTGTTGAAATTTATCCGAGTAGTGAATGGGAGGTCTTTGTTTACTGTTTGAGCGAAAATAAATG
GTGTGTTGGTGAGCCCTTAAAACGGTTATCGATGCCTGATGGTACGCGTATTGCGGCTGTTTTTAGGGGAGACAAACTAT
TGCATCCCTCTGGTAGTACTTGCTTAGAGGCGGGAGATATACTCTGTGTTCTAGGTCAGGAGCGAAGTTTAGATGCATTA
AGCCATCTTTTTAGCCAAGCACCTGAAACTAAGGAAGTTCCACGTTTCTTCGGTGATTTCTTTATTGAGACTGATGTCAA
GTTAGCTGATCTGGCCCCTATCTATGGTTTGGACTTAGATGAGGAGGCGAGTGAGATGACAGTGGCTGATCTTGTGGCAT
CTGAGCTTGGCGCACATCCGGTCATAGGGGATCATTTCCAATGGCAATCTTTACACTGGGTTGTTGCAGGATTGCATGAA
GGCAAAGTGACGAATATCGGGATTCGCTTACCGCCAGAAACCTAG

Protein sequence :
MDADSINSFFLIGALLAAVSVLLSPMSSRLGIPILLIFLAVGILAGEDGLGGIQFDDYSTAYLVSNLALAIILLDGGMRT
RVASFRVALWPALSLATFGVAITTSITGLMAAWLFDLHWLQGLLVGAIVGSTDAAAVFSLLKGRSLNERVGATLEIESGS
NDPMAVFLTVTLIAILANVDTELSVSFMLVSFIKQFGLGICLGLGGGWLLWKLVNLSKLAEGLYSILVLSGGLIIYAVSN
KLGGSGILSIYLVGLFLGNKPTRGRHSILNVLDGMTWVSQIGMFLVLGLLLTPSDLFDILLPGFALAFGMILFARPLAVW
LSLLPFKSFSSRDRWFISWVGLRGAVPIILAVFPMMAGLPGAQLYFNLAFFVVLVSLLIQGASLTTAARLAKVELPPKPL
PISRSGVEIYPSSEWEVFVYCLSENKWCVGEPLKRLSMPDGTRIAAVFRGDKLLHPSGSTCLEAGDILCVLGQERSLDAL
SHLFSQAPETKEVPRFFGDFFIETDVKLADLAPIYGLDLDEEASEMTVADLVASELGAHPVIGDHFQWQSLHWVVAGLHE
GKVTNIGIRLPPET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAB61290.1 unknown Not tested PAI I CFT073 Protein 6e-135 59
f536 AAC61706.1 F536 Not tested PAI I CFT073 Protein 6e-135 59