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Name : Sputcn32_2912 (Sputcn32_2912) Accession : YP_001184428.1 Strain : Shewanella putrefaciens CN-32 Genome accession: NC_009438 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : 3.1.21.3 Position : 3375839 - 3378976 bp Length : 3138 bp Strand : + Note : KEGG: bxe:Bxe_A0222 type I site-specific deoxyribonuclease HsdR; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like DNA sequence : ATGACTGAAGACCAACTGGAACAAGAGGCACTAGGCTGGTTAGGTGAGATTGGTTATACCCACATTTGCGGCTATGACAT CGCCCCAGATGGCGCCAATCCTGAACGGCAGGATTATCGCCAACCCTTGTTGCTAGAGCGATTAAGAAGCGCTATAGCGC GTCTTAACCCGCAAATCCCACAACAGGCCCGTGAGGATGCATTGGCCTCCGTAATGGATTTGCGCATCCCTTCCCTTCTT TCAGCCAATCGCCATTTTCATGGGGTGTTAGTCAATGGTGTGCCTGTTAGTTATCAGAAAGACGGTGAAACCCGTGGTGA TTTTGTCCGACTGATTGACTGGGAAAACCGCCCTGGTACCAATGAGTTTTTAGCTGTAAATCAATACACCTTAAAAGGCC CTCACCATTCACGGCGCCCCGATATCATCCTGTTTATTAATGGGCTGCCATTAGTACTTTTTGAGCTTAAAAACCCGGCA GATGAACACGCCGATATCTGGAAAGCATACGACCAAATCCAGACCTATAAAGAGCAAGTACCGGACGTATTCCAATACAA TGAAATTCTTGTCATATCGGACGGTACCGAAGCACGCATGGGTTCATTATCAGCCAATGCCGAGCGCTATATGCAATGGC GCACCATTGATGGTGTTAACCTCGACCCACTTGGGGCTTTTGGTGAACTTGAAACCATGGTCAGAGGGGTATTTGCCCCG GCTTATTTACTGGATTACCTGCGGTTTTTCGTCCTATTTGAAGATGATGGTCAGTTGGTTAAGAAAATCGCCGGATATCA CCAGTTCCATGCGGTGCGGTCTGCAATAACCCAGGTCGTCACCGCATCTCGGCCTGATGTAATGGGAAGCAATAAGGGTA AAGGCGGGGTGGTTTGGCATACCCAAGGCAGCGGCAAGAGCATCACCATGACCTGTTTTGCGGCACGAGTCATGCGCGAA GCCGCCATGGAAAACCCCACGATTGTGGTCATCACAGATCGTAACGACTTAGACGGCCAATTGTTTGGCGTATTTTCGCT GGCGCAAGATTTGTTACGTGAACAGCCAGTTCAGGTTGAAACTCGCCAGGATCTGCGTGCTAAGCTCGCTAATCGTCCCT CTGGCGGTATCATCTTTGCCACAATTCAAAAGTTCGCCCCCGGCGCCGATGAAGACGTGTTCCCAATTTTATCAGATAGA CACAATATCGTTGTCGTCGCCGATGAGGCACACCGAACCCAGTATGGTTTTGAAGCTAAGCTTAAAGTGCCTGAGTTAAA CGCGGGTGTTGCCGAAGCCAGCGCGGCTTATCACAGCCGTTATCAAGTCGGCTTTGCCCAGCATTTACGCGATGCCTTAC CCAATGCAACCTTTGTAGCCTTTACCGGTACCCCTGTTTCAAGCGAGGACAGGGATACCCGTGCAGTATTTGGCGATTAC ATTCATATTTATGATATGCAGCAGGCCAAAGAGGATGGCGCGACAGTTGCCATCTACTACGAATCTAGACTGGCAAAACT CAAGCTTAAAGAGGAAGAGCTGCCGCATATCGACGATGAAGTCGACGAACTGGCCGAAGACGAGGAAGAGGAACAGCAAT CTAAACTTAAATCTAAGTGGTCAGCACTTGAAAAAATCGTCGGTGCAGAACCTAGGATAGTCAAAGTCGCCGCCGATCTG GTTGCGCACTTTGAGGCACGCCAGCAGGCCCAAACCGGTAAGGCGATGGTGGTAGCCATGAGCCGAGAAATTTGTGTGCA TCTTTATAATGCCATCTGTGCTCTACGCCCAGACTGGCATGATGACGATCCTGAAAAGGGCGCAATCAAAATCGTGATGA CAGGCTCAAGCAGCGATAAACCGCTACTGAGGCCTCATATTCACTCAAAGCAAGTTAAAAAACGTCTAGAAAAGCGTTTT AAAGACCCTAAAGACCCACTTCAAATAGTAATTGTGCGCGATATGTGGCTAACCGGCTTTGATGCCCCTTGTGTTCATAC CCTGTATGTTGATAAGCCAATGAAGGGCCATAACCTTATGCAAGCAATTGCTCGGGTAAACCGGGTATTTAGGGATAAAC AAGGCGGGCTGGTGGTTGATTACATCGGCATAGCAAACGAACTTAAGTCTGCATTAAAAGAATACACTGCGAGTAATGGC AGAGGCCGTCCGACGGTTGACGCGGCCGAGGCTTGGTCATTACTTGAAGAAAAGCTCGACATCCTACGCAGCCTGCTCCA CGGATTCGATTACAGCGACTTCACTAAGGGCGGCCACAAACTGCTCGCAGGAGCCGCAAACCATATCCTTGGGGTCGAAG ATGGCAAAAAGCGCTTTGCCGATAATGCATTGGCCATGAGTAAGGCTTTTAGCCTTTGCTGTACCCTAGATGAGGCTAAA GCAGTACGAGAAGAGGTGGCCTTTTTGCAGGCGGTCAAAGTACTGCTGACTAAGCGCGACCTCAGCGCCAAAAAACGCAG CGATGAAGAAAAAGACATCGCCATTCGCCAAATAATTAGCCAAGCCGTTGTGAGTGATGAGGTAGTCGATATCTTTGATG CTGTCGGGTTGGAGAAACCCAATATAGGGCTACTGGACGATGAGTTTTTGGCCGAGGTTCGCAACTTACCCGAAAAAAAC CTCGCTGTTGAGCTGCTGGAGCGACTGCTTGAAGGGGAAATTAAAAGCCGTTTTGCCAGCAATGTAATCCAACAGAAAAA GTTTTCTGAGCTGCTATCAAACGTTGTTAAGCGTTATCAGAACCGCAGTATTGAAACCGCTCAAGTCATGGAAGAGCTGG TGGACATGGCCAAAAAATTCCGTGAAGCAGCCAAGCGCGGTGAATCATTAGGGCTCAGTGATGACGAGGTGAAATTTTAC GATGCACTCGCCAACAACGAAGCCGCAGTGCTTGAGCTCGGCGATGAAATCTTAAAGAAAATCGCCCATGAGCTAACCGA TAACCTAAGGGCCAATATCAGTGTGGATTGGTCACAGCGTGAAAGCGTTCGCGCTAAATTACGCATTATGGTGAAGCGAA TATTACGTAAATACAAATATCCGCCCGACCAAGCTGATGGCGCAGTGCAATTGGTTTTACAACAAGCTGAGGCCTTAGGC GAGCAATGGGCAGCCTAA Protein sequence : MTEDQLEQEALGWLGEIGYTHICGYDIAPDGANPERQDYRQPLLLERLRSAIARLNPQIPQQAREDALASVMDLRIPSLL SANRHFHGVLVNGVPVSYQKDGETRGDFVRLIDWENRPGTNEFLAVNQYTLKGPHHSRRPDIILFINGLPLVLFELKNPA DEHADIWKAYDQIQTYKEQVPDVFQYNEILVISDGTEARMGSLSANAERYMQWRTIDGVNLDPLGAFGELETMVRGVFAP AYLLDYLRFFVLFEDDGQLVKKIAGYHQFHAVRSAITQVVTASRPDVMGSNKGKGGVVWHTQGSGKSITMTCFAARVMRE AAMENPTIVVITDRNDLDGQLFGVFSLAQDLLREQPVQVETRQDLRAKLANRPSGGIIFATIQKFAPGADEDVFPILSDR HNIVVVADEAHRTQYGFEAKLKVPELNAGVAEASAAYHSRYQVGFAQHLRDALPNATFVAFTGTPVSSEDRDTRAVFGDY IHIYDMQQAKEDGATVAIYYESRLAKLKLKEEELPHIDDEVDELAEDEEEEQQSKLKSKWSALEKIVGAEPRIVKVAADL VAHFEARQQAQTGKAMVVAMSREICVHLYNAICALRPDWHDDDPEKGAIKIVMTGSSSDKPLLRPHIHSKQVKKRLEKRF KDPKDPLQIVIVRDMWLTGFDAPCVHTLYVDKPMKGHNLMQAIARVNRVFRDKQGGLVVDYIGIANELKSALKEYTASNG RGRPTVDAAEAWSLLEEKLDILRSLLHGFDYSDFTKGGHKLLAGAANHILGVEDGKKRFADNALAMSKAFSLCCTLDEAK AVREEVAFLQAVKVLLTKRDLSAKKRSDEEKDIAIRQIISQAVVSDEVVDIFDAVGLEKPNIGLLDDEFLAEVRNLPEKN LAVELLERLLEGEIKSRFASNVIQQKKFSELLSNVVKRYQNRSIETAQVMEELVDMAKKFREAAKRGESLGLSDDEVKFY DALANNEAAVLELGDEILKKIAHELTDNLRANISVDWSQRESVRAKLRIMVKRILRKYKYPPDQADGAVQLVLQQAEALG EQWAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 56 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 46 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 46 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 46 |
