Gene Information

Name : Sputcn32_2528 (Sputcn32_2528)
Accession : YP_001184048.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 2945858 - 2946412 bp
Length : 555 bp
Strand : -
Note : PFAM: sugar transferase; KEGG: son:SO3172 galactosyl transferase

DNA sequence : 
ATGATGCGTTTAATTGATTTACTTGCAGCCTTTTTCGGGTTGCTATTGCTATGGCCAATATTATTCATCGTAACCATCAT
CGGTTTGTTTGATACAGGCTCACCGATTTTTATTCAAACTCGGGTAGGTAAACATAGAAAGCCATTTAAGTTGATTAAGT
TTCGTACTATGAGTAAGGATACGGCATCGGTTGCGAGCCATCTTGCCAGTAATGCTGCCATTACAAAATTTGGCGGTTTT
TTACGCAAAACTAAAATTGATGAACTGCCACAACTGATTAATGTACTAAAAGGTGAAATGAGTTTGGTTGGCCCACGGCC
TAACTTATTTAACCAAGAAGAGTTGATAGCCGAGCGTGATGCATTAGGGGTTTATGATGTGTTACCAGGTGTGACAGGTT
TAGCGCAAGTACAAAATATTGATATGTCCACGCCTAAGTTGCTTGCTCAAACGGATAAGCAAATGATAGATACTTTAACC
TTAGGTCGTTATTTTAAATACATCCTAATGACGGCTACTGGCCGTGGTAGTGGTGATGCTGTTAAGCCAAGTTAG

Protein sequence : 
MMRLIDLLAAFFGLLLLWPILFIVTIIGLFDTGSPIFIQTRVGKHRKPFKLIKFRTMSKDTASVASHLASNAAITKFGGF
LRKTKIDELPQLINVLKGEMSLVGPRPNLFNQEELIAERDALGVYDVLPGVTGLAQVQNIDMSTPKLLAQTDKQMIDTLT
LGRYFKYILMTATGRGSGDAVKPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 4e-23 46
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 7e-25 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputcn32_2528 YP_001184048.1 sugar transferase VFG1309 Protein 2e-23 52