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Name : Sputcn32_2121 (Sputcn32_2121) Accession : YP_001183641.1 Strain : Shewanella putrefaciens CN-32 Genome accession: NC_009438 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis sensory transducer Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 2438150 - 2440018 bp Length : 1869 bp Strand : + Note : PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis protein domain protein; KEGG: vvu:VV21623 methyl-accepting chemotaxis protein DNA sequence : ATGAAGTTCAGTCATAAGATTGTCGCCGCATCCTCTGCGTTACTTTTAGTGACAGTAACGCTACTCACAATAAAACAATA CTACTCCATCCAGAAGGAAATGCAGGCACAAGTCGAAGCCAGTGTCACTGAAATCGTTGATGGTGTAAGAAACACTGTTT CATCGGAAATAGAAGCACGTAAACAACTGGCAGCTTATACCACTAGCTTGATAGAGCAAGATCTCACCCCAGCCCACATC AGTAGCGTTATTACGCGTCCCACGGTCAAAAATGCATTTTTGCTTATCGGTTTCGGATACGAAAAGGATGGCACTAATAT TAATAATAATCCGAGTTGGGATCCCGGCGCAGGATGGGATCCAAGGGCGAGACCTTGGTATAAAGATGCAAAACAAGCCG ATAAATTGATCATCACAGCACCCTATCCTGACTCTGCCTCCGGTGAAATTCTTGTCTCTATCGCAACCCCCGTAAAAGAG AGCGGTCAATTTATTGGGGCAATTTTTTATGATGTTAGCCTTGTTGGATTAGCAACATTAGTCAATGAGGTGAAGCTATT CAACGCTGGATATGTGTTTATTGTTGCACAGGATGGAACGACAATCGCCCACCCAGAAGAAAAGAGAAATGGTACTCCAA TGGCTGACTATCTGCCTAACATCAAAGTGATGGAACAACCTCAAAAAGTGAGTATTGACGGTAAAAACTTCACCTTAGAT TTCTCTAAAGTGGCAGGAGAAAACTGGTATGTCGGCGTTATCTTAGATGAAGATATTGCCTATGCCGCCGTAACCGATTT ACGCAATAGCTCTATTCTCTATACGGTTATCGCTTTACTTATCAGTATTACTGTACTTCTCCTACTCATCACAACTTTGA TGCGCCCATTGCAAACCTTGAATGATGCGATTCAAGATGTCGCTTCTGGAGAAGGTGATTTGACCCAACGTTTGAATACA AAAACCGATACTGAGTTTTCATCTTTAGCCATTAGTTTCAATACCTTCACTGCTAATCTTCAACAACTTATTATTGAATC TAAATCGATTGGTCGACTCATCCATCAGAGTTCAGAAATGACATCGGTAGAGTTACAACAATCAACTGATGCAATGAACT CGCAGCTACATGAACTCGAACAACTTGCCACCGCAATGCATGAAATGGCAACGACCTCAACAGATGTCGCACGCAATGCT CAGGGTGCAGCCTCTGCGGCCAAAGAAGCAGACGACGCCACCAGTGCAGGAACTCGCGTCGTTAGCGATACAACGAAGGC GATTAATGCCTTATCCTCCGAAATCGATATGGCAGTATCTGAAGTCAAAATCTTAGGATCTGCGACAGATAATATTGCGA CTATCTTAAAAGTCATTAACGATATCGCAGATCAAACCAATTTGTTGGCCTTAAATGCGGCAATTGAAGCTGCAAGGGCG GGAGATTCAGGGCGTGGCTTTGCCGTTGTAGCCGATGAAGTCAGAACTCTCGCGCAAAAAACACAGCAATCGACAACACA AATCCGCAATATGATAGAACAACTTCAGCAAGGAGCCCGAGCCGTGGCAGAAGTGATGCACCAAAGTAAGGAAACCGCAA AAGATGCCGTTACCCGCGCCCAAGATGCTAACACTGCACTCGATAAGATCCGTGAAGCCATATTACAAATCACAGACATG AACCTACAAATTGCTTCTGCGGCTGAAGAACAAAGTCTCGTTGCCGAAGAAATAAACAGTAATACAATTAGGATCAAAGA TTTATCTGTCCAAGTTTCAGACACGGCCATTCGTGCTAACTCGGCGATGTATACACAAACGCAACATATCAAAGAACAAG ACGCAATCCTGAATAAATTTATCGTCTAA Protein sequence : MKFSHKIVAASSALLLVTVTLLTIKQYYSIQKEMQAQVEASVTEIVDGVRNTVSSEIEARKQLAAYTTSLIEQDLTPAHI SSVITRPTVKNAFLLIGFGYEKDGTNINNNPSWDPGAGWDPRARPWYKDAKQADKLIITAPYPDSASGEILVSIATPVKE SGQFIGAIFYDVSLVGLATLVNEVKLFNAGYVFIVAQDGTTIAHPEEKRNGTPMADYLPNIKVMEQPQKVSIDGKNFTLD FSKVAGENWYVGVILDEDIAYAAVTDLRNSSILYTVIALLISITVLLLLITTLMRPLQTLNDAIQDVASGEGDLTQRLNT KTDTEFSSLAISFNTFTANLQQLIIESKSIGRLIHQSSEMTSVELQQSTDAMNSQLHELEQLATAMHEMATTSTDVARNA QGAASAAKEADDATSAGTRVVSDTTKAINALSSEIDMAVSEVKILGSATDNIATILKVINDIADQTNLLALNAAIEAARA GDSGRGFAVVADEVRTLAQKTQQSTTQIRNMIEQLQQGARAVAEVMHQSKETAKDAVTRAQDANTALDKIREAILQITDM NLQIASAAEEQSLVAEEINSNTIRIKDLSVQVSDTAIRANSAMYTQTQHIKEQDAILNKFIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0514 | NP_230165.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 4e-96 | 45 |
