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Name : Sputcn32_2007 (Sputcn32_2007) Accession : YP_001183527.1 Strain : Shewanella putrefaciens CN-32 Genome accession: NC_009438 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2289998 - 2291284 bp Length : 1287 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATCCTAAATTTTTACGCAACGAATTAGCTGTTACCGCGGAGCGATTGGCCACTCGAGGCTTTATTTTAGATGT CGCTCATCTTACTCAATTAGAAGAAAAACGTAAGTCGTTGCAAGTGGCTACTGAAGAATTGCAAGCGGCGCGTAATGCCA TCTCTAAATCCATCGGACAAGCCAAAGCCCGCGGTGAAGATGTTGACGCGATCATGGCACAAGTGGGGGATTTAGGCTCT CAACTCGATGCAAAAAAATTAGAACTGGCAGCTGTATTGGAAGAAGTGAATGCGATTGCGATGTCCATGCCTAACCTGCC AGATGAATCTGCGCCAATTGGTGCCGATGAAACACAGAATGTCGAAGTACGCCGTTGGGGCACACCACGTAGTTTTGATT TCCCGATCAAAGATCATATTGACTTGGGCGAAGGATTAAACGGTTTAGATTTTAAAAGCGCGGTTAAGATCACCGGCTCT CGTTTTATCGTAATGAAAGGTCAAATCGCCCGATTAAATCGCGCCTTAGGTCAGTTTATGTTGGATCTGCATACGACTGA GCACGGTTATACCGAAGCCTATGTGCCATTGCTGGTTAATGAAGCGAGTTTACTTGGCACAGGCCAATTGCCGAAGTTTG GTGAAGACTTATTCCATACCAAACCCGCCACCGAAGAAGGTCAAGGGTTAAGTTTGATCCCTACAGCAGAAGTGCCACTC ACTAACTTAGTGCGTGACAGTATAGTCGATGAAGACGAGTTACCGATTAAGCTAACAGCACATACAGCATGTTTCCGAAG CGAAGCAGGATCATACGGCAAAGATACCCGTGGTCTTATTCGTCAGCATCAATTCGATAAAGTTGAACTCGTTCAATTAG TCAAACCAGAAGACTCAATGGCTGCACTTGAAACGCTGACAAATCATGCCGAAACTGTACTGCAACGCTTAGGACTACCA TATCGTACAGTTGTGTTATGTACGGGTGATATGGGTTTTGGCTCAAGCAAGACTTATGACATCGAAGTCTGGTTACCAGG ACAAAATACCTACCGTGAAATTTCTTCTTGCTCAAACATGAAGGATTTCCAAGCCCGCCGTATGCAAGCGCGTTACCGTG TTAAAGCGGATAATAAACCCGCTTTGTTACACACATTAAATGGCTCTGGTTTGGCTGTTGGCCGAACCTTAGTGGCGATA TTAGAAAACTATCAGAATGCTGATGGCAGTGTGACTATACCAGAAGCATTGCGTTCTTATATGGGTGGATTAACCCAAAT CGGTTAA Protein sequence : MLDPKFLRNELAVTAERLATRGFILDVAHLTQLEEKRKSLQVATEELQAARNAISKSIGQAKARGEDVDAIMAQVGDLGS QLDAKKLELAAVLEEVNAIAMSMPNLPDESAPIGADETQNVEVRRWGTPRSFDFPIKDHIDLGEGLNGLDFKSAVKITGS RFIVMKGQIARLNRALGQFMLDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPL TNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVELVQLVKPEDSMAALETLTNHAETVLQRLGLP YRTVVLCTGDMGFGSSKTYDIEVWLPGQNTYREISSCSNMKDFQARRMQARYRVKADNKPALLHTLNGSGLAVGRTLVAI LENYQNADGSVTIPEALRSYMGGLTQIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-110 | 57 |
