Gene Information

Name : Sputcn32_1973 (Sputcn32_1973)
Accession : YP_001183494.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 2260379 - 2260843 bp
Length : 465 bp
Strand : +
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: sde:Sde_1961 putative transcriptional regulator, MerR family

DNA sequence : 
ATGAAACCTAGTTTAAACTCTGTAGTTACTATAGAGTCAATAGGCAGTATCGAGATGATCAAGATTGGAGAGCTGGCAAA
AATCTCTGGCTGTTCTGTGCAAACCATCCGTCACTATGAAAAGGAGCAGCTTCTTGCGGCGAAATTACGTAGCGATGGTA
ATTTCCGCCTCTACGATCACGCTGATATCGAGCGGTTGTTATTCATTAAACACTGCCGGAGTTTAGATCTGAGTTTGGCA
GAAATTCGTCAGTTACTGAGTTTGAATGACTCGCCAATGTCGCAGTGTGATGATGTCAATCAGATGATTGAACAGCATAT
CGAACAGGTAGAACGTCGCATAGCGGATTTAACGCAGCTTAATAAACAACTAAAGGCTTTACGTCTTAGCTGCAACTTGA
AGCGCACGGTAGAGCACTGTGGTATTTTAAAACAACTGAATGAAGCCGTTAGTCAAACCAACTAA

Protein sequence : 
MKPSLNSVVTIESIGSIEMIKIGELAKISGCSVQTIRHYEKEQLLAAKLRSDGNFRLYDHADIERLLFIKHCRSLDLSLA
EIRQLLSLNDSPMSQCDDVNQMIEQHIEQVERRIADLTQLNKQLKALRLSCNLKRTVEHCGILKQLNEAVSQTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 5e-32 50
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 7e-26 44
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-26 44
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 5e-26 44
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 1e-26 44
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 1e-26 44
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-26 44
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 4e-26 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputcn32_1973 YP_001183494.1 MerR family transcriptional regulator BAC0058 Protein 4e-33 53
Sputcn32_1973 YP_001183494.1 MerR family transcriptional regulator BAC0301 Protein 1e-27 48