Gene Information

Name : Sputcn32_1963 (Sputcn32_1963)
Accession : YP_001183484.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2248484 - 2248768 bp
Length : 285 bp
Strand : +
Note : PFAM: transposase IS3/IS911 family protein; KEGG: vpa:VP1788 putative transposase

DNA sequence : 
ATGTCAACAAAGAAAATCCGCAAAACACATACCGCTGAATTTAAAGCTGAAGCACTGAAACTGGCTGATAAGATTGGTGT
TGCAGCCACTGCCAGAGAATTAAAACTGCACGAATCTCAGTTATATAATTGGCGAACAGCAGCCGAGAAAAAATCTACCA
CCAGTGAACGAGAGTCGGAGCTTGCTGCTGAAGTTGCGCGTTTGAAGCGCCAATTGGCTGAGCAGGCAGAGGATTTGGCC
ATCTTAAAAAAGGCGGCCACCTACTTCGCGAAGAACCAAAAGTAG

Protein sequence : 
MSTKKIRKTHTAEFKAEALKLADKIGVAATARELKLHESQLYNWRTAAEKKSTTSERESELAAEVARLKRQLAEQAEDLA
ILKKAATYFAKNQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 4e-21 70
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 4e-21 70
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 2e-20 70
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 2e-20 70
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 3e-22 66
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 4e-22 66
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 3e-22 66
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 3e-22 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputcn32_1963 YP_001183484.1 transposase IS3/IS911 family protein VFG0603 Protein 1e-21 70
Sputcn32_1963 YP_001183484.1 transposase IS3/IS911 family protein VFG1632 Protein 7e-21 70