|
Name : Sputcn32_0197 (Sputcn32_0197) Accession : YP_001181732.1 Strain : Shewanella putrefaciens CN-32 Genome accession: NC_009438 Putative virulence/resistance : Unknown Product : transposase, IS204/IS1001/IS1096/IS1165 family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3464 EC number : - Position : 218776 - 220065 bp Length : 1290 bp Strand : + Note : PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: bxe:Bxe_C0885 transposase, TnpA DNA sequence : ATGACCGAACTTCCCGACAACATCCTTCACCTGCCGCAATACCAAGTACTGGGCTGCAAATCAACCGACGACGAAATGCA CTTCCAGGTGGACGTGCCCGATCCCATCGCCTGCGAGGAATGCGGCGTGCAGGGTGAGTTCGTACGGTTCGGCAAGCGTG ACGTTCCCTATCGTGATCTGCCCATCCACGGCAAGCGGGTCACTCTCTGGGTGGTCCGCCGCCGATACACCTGCCGGGCC TGCAAGACAACATTCAGGCCCCAGCTACCGGAGATGGTGGACGGATTCCGTATGACACTGCGGCTGCATGAGTACGTGGA GAAGGAATCCTTCAACCACCCCTACACCTTTGTGGCGGCACAGACCGGCCTGGACGAGAAGACGGTGCGCGACATCTTCA ACGCCCGCGCCGAGTTCCTGGGGCGCTGGCACCGCTTCGAGACGCCCCGCATCCTGGGCATTGACGAGCTATACCTGAAC AAGCGCTACCGCTGCATTCTGACCAACATTGAGGAGCGAACCCTGCTCGACCTGCTGGCCACCCGCCGCCAGAACGTGGT GACCAACTACCTGATGAAGCTGAAAGACCGGCAGAAGGTCGAGATCGTCAGCATGGACATGTGGAACCCCTACCGGGCAG CGGTCAAGGCTGTGCTGCCCCAGGCCCGTATCGTGGTCGATAAGTTCCATGTGGTGCGCATGGCCAACGATGCCCTAGAG AGAGTGCGCAAGGGCCTCAGAAAGGAGCTGAAACCGTCCCAGAGCCGGACTCTCAAGGGAGACCGGAAAATCCTGCTGAA ACGCGCTCACGAAGTCTCAGACCGGGAGCGCCTCATCATGGAGACCTGGACAGGCGCGTTCCCGCAACTGCTGGCCGCCT ACGAGCACAAGGAGCGCTTCTACGGCATCTGGGACGCCACCACACGGCTCCAGGCAGAAGCCGCCCTGGACGAGTGGATA GCCACCATCCCGAAGGGCCAAAAGGAAGTCTGGAGCGATCTGGTCAGGGCAGTGGGAAACTGGCGCGAAGAGACCATGAC CTACTTCGAGACGGACATGCCCGTCACCAACGCTTACACGGAGTCCATCAACCGACTGGCCAAGGACAAGAACCGTGAAG GGCGCGGTTACTCCTTCGAGGTGATGCGGGCACGAATGCTCTACACCACGAAGCACAAGAAGAAGGCACCGACTGCGAAG GTCTCTCCTTTCTACAAGAAAACCATCGGTTACGGACTGCCGGACTTCGCAGAGGAACTCAACTACGGAGTCGATCTATC AACCATCTGA Protein sequence : MTELPDNILHLPQYQVLGCKSTDDEMHFQVDVPDPIACEECGVQGEFVRFGKRDVPYRDLPIHGKRVTLWVVRRRYTCRA CKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYLN KRYRCILTNIEERTLLDLLATRRQNVVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALE RVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWDATTRLQAEAALDEWI ATIPKGQKEVWSDLVRAVGNWREETMTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAK VSPFYKKTIGYGLPDFAEELNYGVDLSTI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| 1_52 | CAJ77024.1 | Transposase | Not tested | AbaR1 | Protein | 0.0 | 99 |
| 1_386 | CAJ77097.1 | Transposase | Not tested | AbaR1 | Protein | 0.0 | 99 |
| tpnA | ADI24144.1 | transposase | Not tested | AbaR1 | Protein | 0.0 | 99 |
| tpnA | ADZ05772.1 | transposase | Not tested | AbaR11 | Protein | 0.0 | 99 |
| tnpA | ACN81032.1 | transposase of ISL3 family | Not tested | AbaR5 | Protein | 0.0 | 99 |
| tnpA | ACS32044.1 | transposase of ISL3 family | Not tested | AbaR5 | Protein | 0.0 | 99 |
| tnpA | AGK36656.1 | transposase of ISL3 family | Not tested | AbaR26 | Protein | 0.0 | 99 |
| Pmu_03510 | YP_005176249.1 | transposase tnpA | Not tested | ICEPmu1 | Protein | 5e-80 | 43 |
