Gene Information

Name : Sputcn32_0196 (Sputcn32_0196)
Accession : YP_001181731.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 218242 - 218754 bp
Length : 513 bp
Strand : +
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence : 
ATGTCCATTTTTGGCAAACATCTGTCACCGTACGCTCTGTTGTCCATCTCCGGCCTGCTGGCAGCGTCTGATCAGGCCGT
AAAATGGCTGGTGCAACAATCAATGGCATATGGCGAGTCTATTTCAGTGACCTCATTCTTTAACTGGGTACACGTATGGA
ATACCGGTGCCGCATTCAGTCTTTTTGCGAATGGTGGAGGCTGGCAGCGCTACTTTTTTATCGGAATCGCGGTAGTGGTC
TCGATTTTTCTGATCAAGCTGATCCTTGAAAATCGTCATAAAGGAGAAGCCATCGCTTGCAGTCTTATCCTCGGTGGCGC
CATGGGCAACCTGATTGACCGGGTCTTTCGCGGCTATGTTGTGGATTCCTTTGATTTCTATTGGCGAGACTGGCATTGGC
CGGCCTTCAACCTGGCTGATATTGCAATTGTCCTCGGTGCCTTACTTTTAGTTTCCAGCAGCTTGTTGGGTAAAAAAGCA
AACACCAATGCCGAGCCGGATGGATCTGACTGA

Protein sequence : 
MSIFGKHLSPYALLSISGLLAASDQAVKWLVQQSMAYGESISVTSFFNWVHVWNTGAAFSLFANGGGWQRYFFIGIAVVV
SIFLIKLILENRHKGEAIACSLILGGAMGNLIDRVFRGYVVDSFDFYWRDWHWPAFNLADIAIVLGALLLVSSSLLGKKA
NTNAEPDGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 1e-55 98
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 1e-55 98
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 2e-54 98
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 2e-55 98
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 2e-55 98
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 8e-51 98
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 2e-54 98
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 1e-55 98