Gene Information

Name : Sputcn32_0195 (Sputcn32_0195)
Accession : YP_001181730.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Resistance
Product : cation efflux system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1230
EC number : -
Position : 217342 - 218238 bp
Length : 897 bp
Strand : +
Note : KEGG: abo:ABO_1368 cation efflux system permease, putative

DNA sequence :
ATGAGCAAATCCTGTGGTGGCGCCTGTGGCGGTGATGCAACGTCCGCAGCGGATACCGATATACAGGCCTCCTCCGAGGC
GCCAGGGAGATGGGTCAGTGTTTATGCCGTGCCGAAGATGGACTGTCCATCAGAAGAACGAATGATTCGCCTAGCCCTGA
ACGGCTTTGAGGAGATTCGGGCGCTGTCCTTCGACTTGTCGAACCGCCGGCTGAAGGTCGTGCATGACGGCGAGGTCGAG
CCCGTCACCTCGAAACTGAAGACCTTGGGGCTAGGCGCCTCGCTTCAGGAAACCGTCGCTGCAAATCCGGAGACCATCAA
GGCCGCCGAGTTTTCGGCAGCTTCTGCTAAGCAAGAATCCGGGACCCTGCGCTGGTTGCTCGGCATCAATGCACTTCTGT
TCGTGGTGGAAATGACTGCCGGTCTGATCGCCCAGTCCACCGGCCTGATTGGAGAATCCCTGGACAATTTTGCCGATGCG
GCGGTGTACGGGCTTGCCCTTTATGCGGTTGGACATAGCGTGAAAATGCAGGTACGTGCCGCGCATCTTGCTGGTGTACT
GCAACTGATCTTGGCTGTGGGCGTGCTCGTAGAGGTGGTGAGACGCTTTGTATTCGGTAGTGAGCCTGAATCGCTGGTGA
TGATGGCTATCGCATTCGTCGCATTGATTGCCAATACCAGTTGTCTGCTGCTCATATCCAAACATCGGGAGGGCGGGGCG
CACATGAAGGCAAGCTGGATATTCTCGGCCAACGACGTGGTGATCAACCTGGGGGTCATCACCTCCGGCGCTCTGGTCGC
GTGGACCGGGTCCAATTATCCGGATCTGATTATCGGCACCATCGCGGGGGTAATTGTACTTAACGGTGCTAGACGCATTC
TGGCGCTCAAGGATTAA

Protein sequence :
MSKSCGGACGGDATSAADTDIQASSEAPGRWVSVYAVPKMDCPSEERMIRLALNGFEEIRALSFDLSNRRLKVVHDGEVE
PVTSKLKTLGLGASLQETVAANPETIKAAEFSAASAKQESGTLRWLLGINALLFVVEMTAGLIAQSTGLIGESLDNFADA
AVYGLALYAVGHSVKMQVRAAHLAGVLQLILAVGVLVEVVRRFVFGSEPESLVMMAIAFVALIANTSCLLLISKHREGGA
HMKASWIFSANDVVINLGVITSGALVAWTGSNYPDLIIGTIAGVIVLNGARRILALKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
1_376 CAJ77095.1 Heavy metal detoxification protein Not tested AbaR1 Protein 2e-119 95
cadA ADZ05770.1 Co/Zn/Cd efflux system component Not tested AbaR11 Protein 2e-119 95
cadA AGK36654.1 Co/Zn/Cd efflux system component Not tested AbaR26 Protein 2e-119 95
ACICU_00235 YP_001844894.1 heavy metal detoxification protein Not tested AbaR20 Protein 2e-119 95
cadA ACN81030.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 2e-119 95
cadA ACS32042.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 2e-119 95
1_43 CAJ77022.1 Heavy metal detoxification protein Not tested AbaR1 Protein 2e-119 95