Gene Information

Name : Sputcn32_1507 (Sputcn32_1507)
Accession : YP_001183031.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.11
Position : 1720141 - 1721334 bp
Length : 1194 bp
Strand : +
Note : KEGG: she:Shewmr4_2477 methionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase

DNA sequence :
ATGCAAGATGAGTCAGGCAAGATGTGGAAAGCTGCAACACAGGTTATTCATGGCGGCCATGAGCATGAGGCCTTTGGCGC
CTTAGTGACGCCGCTTTATCAAAGTGCGACTTTTGTGTTTGAGTCTGCACAGCAAGGTGGCGAGCGATTTGCGGGTAATG
AGCCGGGGTATATTTACACGCGCTTAGGGAATCCGACAACCGCCGAGCTTGAACGTAAAATGGCGATTTTAGAAGGGGCA
GAGGCCGCCGCCGCGACCGCTTCTGGCATGGGCGCAGTATCCACCGCATTACTGGCTAACTTGCAGATGGGCGATCACTT
AGTGGCATCCAATGCGGTATACGGCTGTACTTTTGCGCTAATGACGTCTCAGTTCGCCCGCTTTGGTATCGAAGTGTCCC
TAGTGGACTTTTCATCGGCAGCAGAAATAGAAGCGGCGATTAAATCCAATACTAAGGTCATTTTCTGTGAAACCCCAGTC
AACCCCCATTTACAGGTGTTTGATTTGGCGGCAATTGCGACTATTGCCAAACGTCATAAGCTAGTGAGTATTGTCGACAA
TACCTTTATGACGCCATTACTGCAAAGACCTCTCGATTTCGGTATAGATATGGTGATCCACAGTGCGACTAAATATCTGA
ATGGCCATGGTGATGTGATTGCGGGAATAGTGTGTGGCAGTGACGAACAGATCCATAGAGTGAAGTATGAAATCTTAAAA
GATATTGGCGCGGTAATATCGCCACACGATGCTTGGCTGATCTTGCGTGGTCTTAAAACCTTAGATGTGCGTTTACAGCG
ACATTGCGATAGTGCTCAGCGTGTGGCGGAGTTTTTGGCGGAACATCCAAGCATTACACGCGTGTATTATCCCGGGCTTG
CCTCTCATCAAGGGCATAAATTTATGGGTAAGCAGATGAAACGTGCTGGTGGTGTTATCGCGTTTGAACTGGCGGCAAAT
TTAGAAGAGGCCATGGCCTTTGTCGGATATCTAAAGTTGTTCTCTATTGCGGTGAGCCTAGGGGATGCTGAATCTCTTAT
TCAACATCCAGCATCGATGACGCATTCACCTTATACGCCAGAGGCAAGGGCTGCCGCTGGAATTGGTGATAATCTGCTGC
GGATCTCTATCGGCTTAGAGGATTGTGACGACATCATCGCCGATTTGAATCAAGCACTAGTGCGTTTGACTTAA

Protein sequence :
MQDESGKMWKAATQVIHGGHEHEAFGALVTPLYQSATFVFESAQQGGERFAGNEPGYIYTRLGNPTTAELERKMAILEGA
EAAAATASGMGAVSTALLANLQMGDHLVASNAVYGCTFALMTSQFARFGIEVSLVDFSSAAEIEAAIKSNTKVIFCETPV
NPHLQVFDLAAIATIAKRHKLVSIVDNTFMTPLLQRPLDFGIDMVIHSATKYLNGHGDVIAGIVCGSDEQIHRVKYEILK
DIGAVISPHDAWLILRGLKTLDVRLQRHCDSAQRVAEFLAEHPSITRVYYPGLASHQGHKFMGKQMKRAGGVIAFELAAN
LEEAMAFVGYLKLFSIAVSLGDAESLIQHPASMTHSPYTPEARAAAGIGDNLLRISIGLEDCDDIIADLNQALVRLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-61 42
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 6e-60 42
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-55 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputcn32_1507 YP_001183031.1 methionine gamma-lyase BAC0207 Protein 5e-79 51