|
Name : Sputcn32_1215 (Sputcn32_1215) Accession : YP_001182742.1 Strain : Shewanella putrefaciens CN-32 Genome accession: NC_009438 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 1358436 - 1359719 bp Length : 1284 bp Strand : - Note : TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: sbo:SBO_3500 arsenical pump membrane protein DNA sequence : ATGTGGTTAGCAGGGGCAATTTTTGTTCTCACCATCGTGTTAGTAATTTGGCAGCCTAAAGGATTAGGCATAGGTTGGAG TGCCACCTTTGGCGCCGTATTGGCCCTACTACTGGGTGTGGTGCACTTAGGGGATATTCCTGTGGTATGGAATATTGTCT GGAATGCGACCGCCACCTTTATTGCCGTGATCATCATCAGTTTATTATTAGATGAGTCGGGATTTTTCGAATGGGCCGCG CTGCATGTGGCCCGTTGGGGCAAAGGTCGTGGCCGTTTACTCTTTACTTACATAGTGTTACTCGGCGCTACTGTTGCTGC CTTATTCGCTAATGATGGTGCGGCGCTGATCCTCACCCCGATTGTCATTGCTATGCTATTGGCACTGGGCTTTAGCGCCG GAGCAACCTTAGCCTTTGTAATGGCGGCGGGGTTTATTGCCGATACCGCGAGTTTGCCGTTAATTGTCTCTAACCTAGTC AATATTGTTTCGGCGGACTTCTTCAACATAGGTTTTAACGAATACGCCTCTGTGATGGTGCCCGTCGATATTGCGGCTAT TAGTGCCACCTTAGTCATGTTGCATCTGTTTTTCCGCAAAGATATTCCCGCGACCTACGACTTGCAAAAACTACGCGAAC CTAAGGCCGCCATTCGCGACCTCAACACCTTTAAAACCGGTTGGGGAGTTTTAGTCTTACTCTTAGTGGGCTTTTTTGGC TTAGAACCGCTCGGAGTGCCCGTGAGTTTAGTGGCTGCTGTGGGTGCACTGATCCTGTTTGTTGTCGCGAAAAAAGGCCA TGCCATAGATACCACTAAGGTACTTCGCGGCGCGCCATGGCAGATAGTGATCTTTTCACTCGGCATGTATCTGGTGGTTT ATGGTCTTCGTAACGCAGGCTTAACCGATTATCTCTCTAATGTATTGAATTATTTGGCAGAACAAGGGCTTTGGGCCGCC ACTATGGGCACAGGCTTCTTGGTCGCGTTTTTATCGTCCATGATGAACAACATGCCCACAGTGTTAATTGGTGCCCTGTC GATAGACGGTAGCAATGCAACTGGCGTGATTAAAGAAGCCATGATTTACGCCAACGTGATTGGTAGCGATTTGGGGCCCA AAATCACCCCCATCGGCAGTTTAGCAACCCTGTTATGGCTGCATGTACTGGCGCAGAAAAATATTAATATTACCTGGGGT TATTATTTCCGCGTCGGCATAGTGATGACGCTACCTGTGCTATTTGTCACCCTAGCGGCACTGGCACTGCGCCTCTCCCT CTAA Protein sequence : MWLAGAIFVLTIVLVIWQPKGLGIGWSATFGAVLALLLGVVHLGDIPVVWNIVWNATATFIAVIIISLLLDESGFFEWAA LHVARWGKGRGRLLFTYIVLLGATVAALFANDGAALILTPIVIAMLLALGFSAGATLAFVMAAGFIADTASLPLIVSNLV NIVSADFFNIGFNEYASVMVPVDIAAISATLVMLHLFFRKDIPATYDLQKLREPKAAIRDLNTFKTGWGVLVLLLVGFFG LEPLGVPVSLVAAVGALILFVVAKKGHAIDTTKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTDYLSNVLNYLAEQGLWAA TMGTGFLVAFLSSMMNNMPTVLIGALSIDGSNATGVIKEAMIYANVIGSDLGPKITPIGSLATLLWLHVLAQKNINITWG YYFRVGIVMTLPVLFVTLAALALRLSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 2e-156 | 87 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 3e-106 | 60 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 7e-108 | 60 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 2e-101 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sputcn32_1215 | YP_001182742.1 | arsenical pump membrane protein | BAC0578 | Protein | 2e-156 | 88 |
| Sputcn32_1215 | YP_001182742.1 | arsenical pump membrane protein | BAC0576 | Protein | 5e-156 | 88 |
| Sputcn32_1215 | YP_001182742.1 | arsenical pump membrane protein | BAC0031 | Protein | 3e-157 | 87 |
| Sputcn32_1215 | YP_001182742.1 | arsenical pump membrane protein | BAC0577 | Protein | 3e-149 | 83 |
| Sputcn32_1215 | YP_001182742.1 | arsenical pump membrane protein | BAC0574 | Protein | 5e-105 | 60 |
| Sputcn32_1215 | YP_001182742.1 | arsenical pump membrane protein | BAC0575 | Protein | 2e-107 | 59 |
