Gene Information

Name : Sputcn32_1096 (Sputcn32_1096)
Accession : YP_001182623.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Unknown
Product : binding-protein-dependent transport system inner membrane protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1176
EC number : -
Position : 1230667 - 1231572 bp
Length : 906 bp
Strand : +
Note : PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: shm:Shewmr7_2998 binding-protein-dependent transport systems inner membrane component

DNA sequence :
ATGAAATTACTCTCAAGATTAAAATGGCCAAGGGGACGCTTCTGGACCATAGGATTGCCCTATGCGTGGCTGCTGTTATT
TTTTGCCTTACCTTTTGCGATTGTGCTCAAGATCAGTTTTTCAACGGCTGCTATCGCTATCCCACCCTATGAGCCGATGT
TCCAATACGCAGATGATGTGCTAAATATTTTTTTGCATCTAGGTAACTATCTGATGTTACTTGATGATTCGCTTTATTAT
TCGGCCTATCTGAGTTCGTTGAAAACCGCATTTATTTCTACTTTAGGCTGCTTAATCATTGGTTATCCCATGGCTTATGC
CATCGCCCGTGCCCCCGCGCGTTTGCAGACAGTATTGCTATTACTGGTGATGTTGCCCTCATGGACCTCGTTCTTAATTC
GCGTTTATGCTTGGATGGGATTGCTCAGCAATACTGGCATTATTAATAATGCACTCATATGGTTAGGTGTTATCTCTGAG
CCATTACAAATTTTAAATACCAATATTGCAGTGTATATCGGCATCATTTATGCCTATTTACCCTTTATGATCCTGCCGCT
ATACGCCAATTTAGTGAAACTCGATATGAGTTTAATTGAGGCCGCATCGGACTTAGGTTCAAGTCGTTTAAATACCTTCT
GGAAAATCACTTTCCCACTCTCTAAAAGCGGTGTGATTGCAGGTTCCATGTTGGTGTTTATTCCTGCAGTGGGTGAGTTT
GTGATCCCCGAATTACTTGGCGGTCCTGATTCATTAATGATAGGTAAAGTGCTGTGGCAAGAATTTTTCAATAATCGTGA
CTGGCCTGTGGCGTCATCACTGGCGATTGTCATGTTGGCACTCTTGATTATTCCTATTACTTTATTCCATCGCTATCAAG
CGCGTAGCTTGGAGAAAGACCTATGA

Protein sequence :
MKLLSRLKWPRGRFWTIGLPYAWLLLFFALPFAIVLKISFSTAAIAIPPYEPMFQYADDVLNIFLHLGNYLMLLDDSLYY
SAYLSSLKTAFISTLGCLIIGYPMAYAIARAPARLQTVLLLLVMLPSWTSFLIRVYAWMGLLSNTGIINNALIWLGVISE
PLQILNTNIAVYIGIIYAYLPFMILPLYANLVKLDMSLIEAASDLGSSRLNTFWKITFPLSKSGVIAGSMLVFIPAVGEF
VIPELLGGPDSLMIGKVLWQEFFNNRDWPVASSLAIVMLALLIIPITLFHRYQARSLEKDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
potB BAA36746.1 - Not tested LIM Protein 2e-37 44