Gene Information

Name : Sputcn32_1085 (Sputcn32_1085)
Accession : YP_001182612.1
Strain : Shewanella putrefaciens CN-32
Genome accession: NC_009438
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 1217269 - 1218765 bp
Length : 1497 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: she:Shewmr4_2926 aldehyde dehydrogenase (NAD(+))

DNA sequence :
ATGAGCACACCGAAGAAACGCAGCGAATGGGAAAGTCTGGCTGCCAGCCTGTCTATTAATGGTAAGGCGTTTATCAATGG
CGAATACCAAGATGCCGTTTCGGGTAACACCTTTGATTGTATTAGTCCTATCGATGGCCGCTTGTTGGTAAAAGTGGCGA
GTTGCGATCTTGCGGATGCCAATCTTGCGGTTGCTAATGGCCGCAGCGTATTTGAGTCTGGTGTTTGGTCGCAGCAGTCT
CCGGTAAAGCGCAAACAAGTGATGATACGTTTCGCCGAGTTACTGGAGGAAAATGCCAATGAACTCGCGCTGTTAGAAAC
CCTCGACATGGGTAAACCGATCCGTTTCTCCAAAGCGGTGGATGTGGCGGGGGCTGCCCGTGCGATTCGCTGGTCTGGCG
AGGCGATTGATAAAATTTACGATGAACTTGCGCCAACGGCTCACAATGAAATAGGCATGATCACCCGTGAACCTGTCGGT
GTTGTTGCTGCCATTGTTCCGTGGAACTTCCCAATGCTGATGGCGTGTTGGAAGCTCGGGCCCGCGCTGGCCACGGGTAA
CAGTGTGGTGTTAAAACCCTCTGAAAAGTCACCCTTAACGGCTATCCGTATGGCGCAACTCGCCATTGAAGCTGGGATCC
CACAAGGCGTACTCAACGTGTTGCCAGGATTTGGTCATACCGTGGGTAAAGCCTTAGCGTTGCATATGGATGTGGATACG
TTGGTGTTCACGGGGTCCACCAAAATCGCAAAACAATTAATGATTTACGCTGGCGAGTCGAACATGAAACGCGTGTGGTT
AGAGGCGGGAGGCAAGAGCCCCAATATCGTCTTTAATGACGCGCCAGATCTGAAAGCCGCTGCTGTAGCTGCGGCCGAAG
CCATTGCTTTTAATCAAGGTGAAGTTTGCACTGCAGGTTCGCGTTTGCTGGTGGAATCTGGGGTGAAAGATGAGCTTATC
GCGCTTATTGCTGAGGAGTTAGCCTCATGGCATCCGGGGCATCCACTCGATCCCGCCACTGTGAGCGGCGCCGTTGTCGA
TAAACAACAGTTAGATACAGTACTCAGTTACATCAAAGCGGGTAAAGATGGAGGTGCAACCTTAGTCCACGGTGGCTGCC
AAGTTATGGCCGACACGGGTGGTGTGTATGTGCAGCCAACGGTATTTTCTAACGTAAACAACCAGATGAAAATTGCCAGT
GAAGAAATCTTTGGCCCTGTGTTATCTGTCATTGAATTTAATGGCATGGAAGAGGCGATATCAATAGCCAACGATACCAT
CTACGGCTTAGCTGCTGGCGTGTGGACATCGGATATTAGCAAGGCCCATAAAACCGCTAAAGCCCTGCGCGCTGGCATGG
TGTGGATCAACCATTACGATGGCGGCGACATGACAGCGCCATTCGGTGGCTATAAACAGTCAGGTAATGGCCGAGATAAA
TCTCTGCACTCCTTCGACAAATACACAGAACTGAAAGCGACGTGGATCGTGCTATAA

Protein sequence :
MSTPKKRSEWESLAASLSINGKAFINGEYQDAVSGNTFDCISPIDGRLLVKVASCDLADANLAVANGRSVFESGVWSQQS
PVKRKQVMIRFAELLEENANELALLETLDMGKPIRFSKAVDVAGAARAIRWSGEAIDKIYDELAPTAHNEIGMITREPVG
VVAAIVPWNFPMLMACWKLGPALATGNSVVLKPSEKSPLTAIRMAQLAIEAGIPQGVLNVLPGFGHTVGKALALHMDVDT
LVFTGSTKIAKQLMIYAGESNMKRVWLEAGGKSPNIVFNDAPDLKAAAVAAAEAIAFNQGEVCTAGSRLLVESGVKDELI
ALIAEELASWHPGHPLDPATVSGAVVDKQQLDTVLSYIKAGKDGGATLVHGGCQVMADTGGVYVQPTVFSNVNNQMKIAS
EEIFGPVLSVIEFNGMEEAISIANDTIYGLAAGVWTSDISKAHKTAKALRAGMVWINHYDGGDMTAPFGGYKQSGNGRDK
SLHSFDKYTELKATWIVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-120 58
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-71 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-71 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-71 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-71 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sputcn32_1085 YP_001182612.1 aldehyde dehydrogenase VFG0082 Protein 2e-71 42