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Name : Csac_0828 (Csac_0828) Accession : YP_001179637.1 Strain : Caldicellulosiruptor saccharolyticus DSM 8903 Genome accession: NC_009437 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 930968 - 932455 bp Length : 1488 bp Strand : + Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type DNA sequence : ATGCAGGAGTTTGAGTTTACACAAGAGGAACTAAACGAGCAGATACAAAATAGGATAAAGAAACTAAGAGAACTTCAGCA AAATAAGTACAATCCATACGAAAAGGTAAAGTATGATTCTACTCATTATTCAACAGAGATTAAAGAAAATTTTGAGAAGT TTGAAGGTCAGTTTGTCTCTGTTGCAGGAAGAATGCTATCAAAAAGGGGTCATGGTAAAGCTTCGTTTGTTGATATTTTG GACCCAAAAGGGAAAATTCAAATTTATATTAAGATTGATGAAGTTGGCGAGGAGAAATACCAGGAGTTCAAGGAATACTA TGATATTGGCGATATTATAGGTGTCAAAGGTGAGGTCTTCAAGACACACAAAGGCGAGATTTCAATCAAGGCTAAAGAAA TTGAGATGCTTACGAAGTGTCTTAGGCCTCTTCCTGAAAAATGGCACGGCTTGAGGGATGTAGATACAAGATACAGAAAA AGATACCTTGATCTGATTGTAAATCACCAGGTGAGAGACACATTTATTAAAAGGAGCTTAATGATTCGCTCAATCAGGAA ATATTTAGACGACAGAGGCTTTTTAGAGGTAGAAACGCCGGTTTTAAGCCCTATTGCAGGTGGTGCTGCTGCAAGGCCAT TTATTACTCACCACAACGCACTTGACATTGACCTGTACCTTAGAATAGCAACAGAGCTTCATTTAAAAAGGCTTATTGTT GGCGGGTTTGATAAAGTTTACGAGCTTGGTCGTGTGTTTAGAAACGAAGGTATTTCAATCAAGCACAATCCAGAATTTAC AACAATTGAGATTTACCAGGCCTATGCTGATTATAAGGATATGATGAATTTAACCGAAGAACTAATAACAACTGTTGCAA AAGAGGTTTTAGGAACGTTAAAAATAACATATCAGGGGCAAGAGATTGACTTGACACCACCTTGGCAAAGGCTTACAATG ATTGATGCGATAAAAAAATATGTAGGAGTTGACTTTTCACAGGTATCTTCTTTGGATGAGGCAAGAAAGATTGCAAAAGA CCTTGGTATTGAAGTTGAGGAAAATTGGCAAGTAGGCCACATTATAAACGAGGTTTTTGAGCAAAAGGTTGAGGATTTTT TGGTCCAGCCAACATTTATTATGGACTACCCAGTTGAAGTATCACCGCTTGCAAAGAGGAAAAAAGACAACCCACAGTTT ACAGAAAGGTTTGAACTTTTCATCACATGCAGGGAGATTGCGAACGCTTTTTCGGAACTAAACGATCCGTTTGACCAAAA AGAAAGGTTTTTAGAACAGCTGAAGGAAAGGCAAAGAGGTAACCAAGAAGCTCACATGATGGACGAAGACTTCATAGAAG CGTTAGAGTACGGAATGCCGCCGACAGGTGGGCTTGGCATTGGAATTGACAGGCTGGTAATGCTTTTAACAGACTCATAC TCTATCAGAGATGTTTTACTCTTCCCGACAATGAGACCGAAAGATTAA Protein sequence : MQEFEFTQEELNEQIQNRIKKLRELQQNKYNPYEKVKYDSTHYSTEIKENFEKFEGQFVSVAGRMLSKRGHGKASFVDIL DPKGKIQIYIKIDEVGEEKYQEFKEYYDIGDIIGVKGEVFKTHKGEISIKAKEIEMLTKCLRPLPEKWHGLRDVDTRYRK RYLDLIVNHQVRDTFIKRSLMIRSIRKYLDDRGFLEVETPVLSPIAGGAAARPFITHHNALDIDLYLRIATELHLKRLIV GGFDKVYELGRVFRNEGISIKHNPEFTTIEIYQAYADYKDMMNLTEELITTVAKEVLGTLKITYQGQEIDLTPPWQRLTM IDAIKKYVGVDFSQVSSLDEARKIAKDLGIEVEENWQVGHIINEVFEQKVEDFLVQPTFIMDYPVEVSPLAKRKKDNPQF TERFELFITCREIANAFSELNDPFDQKERFLEQLKERQRGNQEAHMMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSY SIRDVLLFPTMRPKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-118 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Csac_0828 | YP_001179637.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-118 | 51 |
