Gene Information

Name : Csac_0660 (Csac_0660)
Accession : YP_001179471.1
Strain : Caldicellulosiruptor saccharolyticus DSM 8903
Genome accession: NC_009437
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 731565 - 732242 bp
Length : 678 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATTGAACTTTATGACATTTACAAAATATACAAAATGGGTGATATTAATCTATATGCTTTAAACAGTGTAAACCTCAA
AATATTAAAAAACGAATTTGTTGCAATTCTTGGACCCTCTGGTTCAGGAAAATCCACATTGATGAATATAATAGGCTGTC
TTGACACACCAACTTCTGGAAGATATATTTTGGATGGAAATGAGGCAAGTAAACTCTCTGACAATCAGCTTGCAGAGATT
CGAAACAGCAAAATAGGCTTTGTATTTCAGCAGTTCAATTTAATTCCACAGTTAACTGCTCTTGAGAATGTTGAACTGCC
TTTAATATACAAAGGGATGTCGGCATCAAAAAGACACAAGATTGCGAAAGAAGCACTTGAACGCGTAGGGCTTTCTGACA
GGATAAATCACAGACCTCGACAGCTATCTGGTGGGCAGCAACAGAGGGTTGCCATTGCAAGAGCAATTGTGACAAATCCT
TCAATAATTTTAGCTGATGAGCCGACAGGAAACTTAGATTCAAAATCTGGCGAAGAAATTATGCAAATTTTCAAACAACT
TCATAGCCAAGGCTGTACTGTGGTGTTAATTACACATGACAATCACATTGCCTCTCAGGCAAAAAGGATTGTAAGAATTC
ATGATGGGAAAATAATAGAAGATAGAAAAATTGCTTAA

Protein sequence : 
MIELYDIYKIYKMGDINLYALNSVNLKILKNEFVAILGPSGSGKSTLMNIIGCLDTPTSGRYILDGNEASKLSDNQLAEI
RNSKIGFVFQQFNLIPQLTALENVELPLIYKGMSASKRHKIAKEALERVGLSDRINHRPRQLSGGQQQRVAIARAIVTNP
SIILADEPTGNLDSKSGEEIMQIFKQLHSQGCTVVLITHDNHIASQAKRIVRIHDGKIIEDRKIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-34 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csac_0660 YP_001179471.1 ABC transporter NC_012469.1.7686878. Protein 4e-61 58
Csac_0660 YP_001179471.1 ABC transporter CP001581.1.gene598.p Protein 1e-40 49
Csac_0660 YP_001179471.1 ABC transporter NC_008702.1.4606598. Protein 3e-49 46
Csac_0660 YP_001179471.1 ABC transporter CP001581.1.gene798.p Protein 3e-39 45
Csac_0660 YP_001179471.1 ABC transporter NC_012469.1.7685735. Protein 2e-35 42