Gene Information

Name : Csac_0268 (Csac_0268)
Accession : YP_001179106.1
Strain : Caldicellulosiruptor saccharolyticus DSM 8903
Genome accession: NC_009437
Putative virulence/resistance : Virulence
Product : ribonuclease III
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : 3.1.26.3
Position : 273772 - 274719 bp
Length : 948 bp
Strand : +
Note : PFAM: glycosyl transferase, family 2

DNA sequence : 
ATGCCACTGAGAGTATACTTTGTAATCCCCTGTTTTAACGAAGAAGAAATGCTGCCTTTCACAATTCAAAAGATGGGTGA
AAAACTGCAAAGCCTCATTGAAAAAGAGCTAATTTCTGATAAAAGCAAAGTTGTCTTTGTTGACGATGGAAGCCGTGATA
GAACGTGGGATCTAATCAAAGCTGCTGCAGAGGATAAGAGATTTTTGGGGGTCAAACTTTCGCGAAACTGTGGGCATCAA
AACGCCCTTATGGCAGGAATGAGCTATGCTGTAAAGTTTGCTGATTGTATAATTACATTGGATGCAGATTTGCAGGACGA
TATCAATGTCATTGATGAGTTTATTCAAAAGTACAAGGAAGGCTATGAGATTGTGTATGGAGTGAGAAGCAGCAGAAAAA
CAGATACGTTTTTCAAAAGGTTTACTGCAGAGGGCTTTTATAAACTAATGAAGGCATTTGGAGTTGAGATTGTTTTTAAT
CATGCTGATTACAGGCTCATGAGTAAAAGAGCAGTCCAGTATCTTTTGCAGTTTGAAGAGAGAAACTTGTTCTTAAGAGG
TATGATTCCATTAATTGGCTTAAAATCAACAGTTGTCTACTATGAAAGATTAGAAAGAGTAGCAGGAAAGACAAAGTATC
CGCTCAAGAAAATGCTCTCTTTTGCTTTTGAAGGGATTACATCTTTTTCGGTAAAGCCCATAAAGTATATCACAACAGCT
GGTTTTTTGATGTTTTTGCTAAGTTTTCTAATTCTTATATATGCAATAGTACAGAAATTAAGAGGACAAGCTGTCACAGG
CTGGACTTCGCTTACAATTTCAATTTGGTTTATAGGCGGGCTTCAGCTTGTTGCCTTAGGGCTCATTGGTGAGTATATTG
GCAAAATTTATAAAGAGGTCAAAAGAAGGCCTTTATACTTCATTGAGGAGATAGCAGGGGATGAATAA

Protein sequence : 
MPLRVYFVIPCFNEEEMLPFTIQKMGEKLQSLIEKELISDKSKVVFVDDGSRDRTWDLIKAAAEDKRFLGVKLSRNCGHQ
NALMAGMSYAVKFADCIITLDADLQDDINVIDEFIQKYKEGYEIVYGVRSSRKTDTFFKRFTAEGFYKLMKAFGVEIVFN
HADYRLMSKRAVQYLLQFEERNLFLRGMIPLIGLKSTVVYYERLERVAGKTKYPLKKMLSFAFEGITSFSVKPIKYITTA
GFLMFLLSFLILIYAIVQKLRGQAVTGWTSLTISIWFIGGLQLVALGLIGEYIGKIYKEVKRRPLYFIEEIAGDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 4e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csac_0268 YP_001179106.1 ribonuclease III VFG0670 Protein 5e-36 41