Gene Information

Name : Csac_2447 (Csac_2447)
Accession : YP_001181215.1
Strain : Caldicellulosiruptor saccharolyticus DSM 8903
Genome accession: NC_009437
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2591187 - 2591864 bp
Length : 678 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGATTGAACTTTATGACATTTACAAGATCTACAAAATGGGCGAAAATGAAGTGTATGCTTTAAACGGTGTCAGCTTGAA
AATCAACCCACACGAGTTTGTAGCAATTGTAGGTCCATCAGGGTCTGGCAAGTCAACTCTTATGAACATCATAGGTTGTC
TTGACACACCAACATCTGGCACATACATACTGGATGGTCATGAAGTAAGCAGGCTCAACGACAACCAGCTTGCTGAGATT
CGGAACAGCAAGATAGGCTTTGTGTTTCAAAACTTTAACTTGATACCACAGCTCACAGCTCTTGAAAACGTTGAGCTTCC
TTTAATCTACAAAGGGACTCCAGCATCAACACGTCACAAGCTTGCAAAAGAAGCCTTAGCAAGGGTTGGCTTAGAGCACA
GAATGCATCACAGACCAAGAGAGCTATCTGGCGGTCAGCAGCAGAGAGTTGCAATTGCAAGGGCGCTTGTCACAAACCCG
GCAATAATTCTTGCTGATGAGCCAACAGGAAACCTGGACTCAAAATCAGGTGCTGAAATAATGCAAATATTCAAGGAACT
TCATGCACAGGGTAGCACAATTATTTTAATCACACACGACAACAACATAGCAGCTCAGGCAAGAAGAATTGTGCGGATTC
AGGACGGTCAAATAATAGAGGATAAGGAGGTGAGCTGA

Protein sequence :
MIELYDIYKIYKMGENEVYALNGVSLKINPHEFVAIVGPSGSGKSTLMNIIGCLDTPTSGTYILDGHEVSRLNDNQLAEI
RNSKIGFVFQNFNLIPQLTALENVELPLIYKGTPASTRHKLAKEALARVGLEHRMHHRPRELSGGQQQRVAIARALVTNP
AIILADEPTGNLDSKSGAEIMQIFKELHAQGSTIILITHDNNIAAQARRIVRIQDGQIIEDKEVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 7e-38 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csac_2447 YP_001181215.1 ABC transporter NC_012469.1.7686878. Protein 8e-62 59
Csac_2447 YP_001181215.1 ABC transporter CP001581.1.gene598.p Protein 8e-43 50
Csac_2447 YP_001181215.1 ABC transporter NC_008702.1.4606598. Protein 6e-50 50
Csac_2447 YP_001181215.1 ABC transporter CP001581.1.gene798.p Protein 5e-41 47
Csac_2447 YP_001181215.1 ABC transporter NC_012469.1.7686946. Protein 4e-30 42