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Name : Csac_2428 (Csac_2428) Accession : YP_001181196.1 Strain : Caldicellulosiruptor saccharolyticus DSM 8903 Genome accession: NC_009437 Putative virulence/resistance : Unknown Product : alpha amylase catalytic domain-containing protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 2569902 - 2571572 bp Length : 1671 bp Strand : + Note : PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain DNA sequence : ATGCATAAAAAATGGTGGAAAGAAGTTGTTGTTTATCAAATCTACCCGAGAAGCTTTTATGACTCAAACGGTGATGGAAT TGGGGATTTGCCAGGAATTATCCAGAAGCTTGACTATTTAAAAGAGCTTGGGGTTAATGTAATCTGGTTAAATCCAATTT ATAAATCTCCAAATGCCGACAATGGATATGACATTAGTAGCTATTATGATATTATGGATGAATTTGGAACAATGGAAGAC TTCGACAAGCTTTTGCAAGAGGCTCATAAACGCGGAATAAAAATTGTGATGGATTTAGTAGTAAATCACACCTCTGATGA ACACAAATGGTTTTTAGAGTCCAGAAAATCAAAAGACAATCCTTACAGAGATTTTTATTTCTGGCGACCTGGCAAAAATG GAGGGCCACCTAATAACTGGACATCCTTTTTCAGTGGTCCTGCTTGGGAATACGATGAGCTGACAGGAGAATATTATCTT CACCTTTTTGCTGTAAAGCAACCAGACCTTAATTGGGACAATCCAAAAGTCAGACAAGAAATTTACAAAATGATGAAGTG GTGGCTTGACAAGGGCATAGACGGTTTTAGAATGGATGTAATAAACCTCATTTCAAAAGTTGAAGGGCTGCCAGATGATA AAGAAGGTGAAAAGCAAGGAGGTCTAATTGGCTTTAGATATTATGCCAACGGTCCAAGAGTGCATGAATATCTTCAGGAA ATGAACAGAGAAGTTCTTAGCAAATATGATATCATGACAGTTGGCGAAACCCCATTTGTCACACCCGAAATTGCAAAGCT ATATGTGGAGTATGACAGAAATGAGCTTAATATGCTCTTTCATTTTGAACATATGGATATGGACTGCAGCGGCAGCAAGT GGAATATAAAACCTTGGAAACTCACTGATTTGAAAAAGATAATGTACAAGTGGTACTTAGCTTTAAAAGACAAGGGCTGG AATTCACTTTACCTTAACAACCATGACCAGCCAAGGATGGTCTCACGCTTTGGAAACGACAAAGAGTACAGGGTTGAGTC TGCAAAGCTTTTAGCAACCCTGCTTCACACATGGCAGGGAACTCCTTATATTTACCAGGGCGAAGAGATTGGTATGACAA ACTGCAAGTTTGAAAGTATTGATGAGTTCAGAGACATTGAAACACTCAACTGGTACAAAGAGATGAAAAAGCTTGGAAAA TCAGATGAAGAGCTTTTAGAAATCTTAAACAAGAGAAGCAGAGACCATGCACGAACACCAATGCAGTGGGATGATTCTGA AAACGCAGGGTTTACTAAAGGCACACCGTGGATAAAGGTAAATCCAAATTATAAGGAAATAAATGTTAAAAAAGCTTTAG AAGATAAAAACTCTGTTTTCTATTACTACAAGAAATTGATTGAATTTAGAAAAAGGCACCCTGTCATTGTATATGGTGAT ATACAGATGCTTTATGAAAATGATGAAAAGATTTTTGCATATACAAGAAATTATGAAGATGAGAGGCTTCTTGTTGTCAT GAACTTTTCTGAAGAAGAAAGTGAGTTTTTAGCACCAAAAGAAATATTTACTCAAAAACCTGAGCTTTTGATTAGTAACT ATGAAATAGATGATAATATTCAAGAAAAAATTGTTTTAAAACCCTATGAAGCAAGGGTATATAAAATATAA Protein sequence : MHKKWWKEVVVYQIYPRSFYDSNGDGIGDLPGIIQKLDYLKELGVNVIWLNPIYKSPNADNGYDISSYYDIMDEFGTMED FDKLLQEAHKRGIKIVMDLVVNHTSDEHKWFLESRKSKDNPYRDFYFWRPGKNGGPPNNWTSFFSGPAWEYDELTGEYYL HLFAVKQPDLNWDNPKVRQEIYKMMKWWLDKGIDGFRMDVINLISKVEGLPDDKEGEKQGGLIGFRYYANGPRVHEYLQE MNREVLSKYDIMTVGETPFVTPEIAKLYVEYDRNELNMLFHFEHMDMDCSGSKWNIKPWKLTDLKKIMYKWYLALKDKGW NSLYLNNHDQPRMVSRFGNDKEYRVESAKLLATLLHTWQGTPYIYQGEEIGMTNCKFESIDEFRDIETLNWYKEMKKLGK SDEELLEILNKRSRDHARTPMQWDDSENAGFTKGTPWIKVNPNYKEINVKKALEDKNSVFYYYKKLIEFRKRHPVIVYGD IQMLYENDEKIFAYTRNYEDERLLVVMNFSEEESEFLAPKEIFTQKPELLISNYEIDDNIQEKIVLKPYEARVYKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-148 | 58 |
