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Name : Csac_1456 (Csac_1456) Accession : YP_001180247.1 Strain : Caldicellulosiruptor saccharolyticus DSM 8903 Genome accession: NC_009437 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1618117 - 1619379 bp Length : 1263 bp Strand : + Note : TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); seryl-tRNA synthetase, class IIa DNA sequence : ATGCTTGATTTAAAGTTTATAAGATCAAACCCAGAAAAAGTCCAAGAAGGGCTCAATAAAAGAAATAAGGATATTTCAAT TGCACCTATTTTAGAACTTGATGAGAAGAGAAGGAAACTTCTTGCAGAAGTTGAAAAAATGAAAGCTATTCAAAATCAAA AGTCAAAAGAGATTCCAAAGCTTAAAAAAGAAGGAAAAGACACAACAGAGCTTATGAATGAGCTAAAAGAGTTGTCTGAT AAAATTAAAGAGTTAGATAGCCAGGTTAAAGAAGTCGAGGATGAGATAGAAAAGATTTTGCTAACCATTCCCAATATTCC TCATGAGTCTGTGCCGATTGGCAAGGACGATACAGAGAACGTTGAGGTGCGCAGATGGGGAGAGCCAAGGGTCCCTGATT TTGAGATAAAGCCTCACTGGGAAATAGGAGAAAAATTGGGGATTTTAGATTTTGAAAGAGCCTCAAAAGTTTCAGGTAGC CGCTTTACATTTTACAGAGGACTTGGTGCAAGGCTTGAGAGAGCCTTAATTAACTTTATGCTTGACCTTCACATAGAAAA ACACGGCTATGTTGAGCTTTTCCCACCTTTTTTGGTTGCCAGAAAATCTATGATTGGCACAGGGCAGCTTCCAAAGTTTG AAGAAGATGCTTTTAAAACAACAGATGATTACTTTTTGATTCCAACTGCGGAGGTGCCTGTTACAAACTACCACAGAGAA GAGATACTAAAAGAAGAAGACTTGCCAATAAAATATGTTGCCTACTCTGCATGTTTTAGGGCAGAGGCTGGTGCTGCTGG CAAAGACACAAGAGGGCTTATTCGCCAGCATCAGTTTAACAAGGTTGAGCTTGTAAAGTTTGCAAAACCAGAAGATTCTT ATGATGAGCTTGAGAAGCTTACAGCCGATGCTGAGGATGTGCTAAAGCACTTAGGATTACCATACAGGGTTGTTTTACTT TGTTCAGGTGATTTAGGTTTTTCGTCTGCAAAGACGTACGACATTGAAGTTTGGATGCCAAGTTACGGAAGATATGTTGA AATTTCATCCTGTTCTAATTTTGAAAGCTTCCAAGCAAGAAGAGCAAATATCAGGTTTAGAAGAAAAGATGGGAAGCTTG ACTTTGTTCATACGTTGAATGGTTCAGGACTTGCAGTGGGAAGAACTGTAGCAGCAATACTTGAAAACTTCCAGCAAAAG GATGGAAGTGTAGTTGTGCCTGAGGTTTTGAGAAAGTATATGGGTACAGACATTATAAAATAA Protein sequence : MLDLKFIRSNPEKVQEGLNKRNKDISIAPILELDEKRRKLLAEVEKMKAIQNQKSKEIPKLKKEGKDTTELMNELKELSD KIKELDSQVKEVEDEIEKILLTIPNIPHESVPIGKDDTENVEVRRWGEPRVPDFEIKPHWEIGEKLGILDFERASKVSGS RFTFYRGLGARLERALINFMLDLHIEKHGYVELFPPFLVARKSMIGTGQLPKFEEDAFKTTDDYFLIPTAEVPVTNYHRE EILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEDSYDELEKLTADAEDVLKHLGLPYRVVLL CSGDLGFSSAKTYDIEVWMPSYGRYVEISSCSNFESFQARRANIRFRRKDGKLDFVHTLNGSGLAVGRTVAAILENFQQK DGSVVVPEVLRKYMGTDIIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-119 | 59 |
