|
Name : Csac_1372 (Csac_1372) Accession : YP_001180165.1 Strain : Caldicellulosiruptor saccharolyticus DSM 8903 Genome accession: NC_009437 Putative virulence/resistance : Resistance Product : D-alanyl-alanine synthetase A Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1181 EC number : 6.3.2.4 Position : 1543671 - 1544765 bp Length : 1095 bp Strand : + Note : TIGRFAM: D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp DNA sequence : ATGACCAAATTAAAGGTTGCAGTTTTGTTCGGTGGAGTTTCAACAGAGCATGAAGTTTCGATAGTATCTGCAAAATCGGT TATGCAAAACCTTGACAAGGAAAAATACGAAATAATACCAATTGGTATTACAAAAGAGGGAAAATGGCTTTTGTACACAG GCAAGATAGAAGATTTAGACAGCAAATGGACAATGTATTCAATTGAATGTTTTATCTCACCAGACAGGACTAAAAAAGCG CTTGTGAAGATAAAAGATAGTGAAGCTACCTTTATTGACATTGACGTTGTATTTCCTGTATTGCATGGATTAAATGGTGA GGATGGTACTGTACAAGGCCTTTTAGAACTCTCTGGTATTCCATATGTTGGGTGTGGAGTGTTGTCATCAGCGCTATGCA TGGACAAAGCTTTCGCCAAAAAACTTGCTCTTTTAGAGGGGATTCCACAGGGCCACTTTTTGGTGATTTACAAAGATGAG TATCTTTCCAAAAAAGAATATTTCATCAGACGGATTGAAAGTGAGTTTTCGTATCCTGTATTTGTAAAGCCTGCAAATTC GGGCTCCTCAGTTGGGATTTCAAAGGCAAAAGACAAAGACGAGCTGATTTTGGCAATCCACGAGGCATTTTTGTATGATA CCAAGATTTTGATCGAACAGGCTATAAATGCACGTGAGATTGAGTGTGCAGTGCTTGGCAATAGCGAAATTCTCGTATCG GCCCTGGGTGAGATAGTACCATCGCGAGAGTTTTATTCATATGAAGCCAAGTATATAGATGGCTCATCAGAATTGATCAT TCCTGCGAAACTTGAAAAGCAGGTAGAGGATGAGATTAAGGAGCTTGCTGTTAAGATTTACAAGCTTTTTGAGTGTAGTG GTATGGCAAGAATAGACTTTTTTGTTGACAAAGAAACTAACAAGGTGTATTTCAATGAAGTAAATACAATCCCTGGCTTT ACAAGTATTTCTATGTATCCAAAATTGATGGAGTACAGCGGTATACCATATCCTCAACTTCTTGACAAACTCATACAACT TGCAATTGAAAAGAACCAACAAAAACAAAGCATAAAATATAGCAAAGAGGGTTAA Protein sequence : MTKLKVAVLFGGVSTEHEVSIVSAKSVMQNLDKEKYEIIPIGITKEGKWLLYTGKIEDLDSKWTMYSIECFISPDRTKKA LVKIKDSEATFIDIDVVFPVLHGLNGEDGTVQGLLELSGIPYVGCGVLSSALCMDKAFAKKLALLEGIPQGHFLVIYKDE YLSKKEYFIRRIESEFSYPVFVKPANSGSSVGISKAKDKDELILAIHEAFLYDTKILIEQAINAREIECAVLGNSEILVS ALGEIVPSREFYSYEAKYIDGSSELIIPAKLEKQVEDEIKELAVKIYKLFECSGMARIDFFVDKETNKVYFNEVNTIPGF TSISMYPKLMEYSGIPYPQLLDKLIQLAIEKNQQKQSIKYSKEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanB | YP_008394259.1 | Vancomycin B-type resistance protein vanB, D-alanine--D-lactate ligase | Not tested | Not named | Protein | 5e-59 | 43 |
| vanB | NP_815951.1 | D-alanine--D-lactate ligase | Not tested | Not named | Protein | 7e-60 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Csac_1372 | YP_001180165.1 | D-alanyl-alanine synthetase A | AY489045.gene.p01 | Protein | 3e-58 | 45 |
| Csac_1372 | YP_001180165.1 | D-alanyl-alanine synthetase A | AF277571.gene.p01 | Protein | 1e-59 | 45 |
| Csac_1372 | YP_001180165.1 | D-alanyl-alanine synthetase A | NC_005054.2598280.p0 | Protein | 2e-62 | 44 |
| Csac_1372 | YP_001180165.1 | D-alanyl-alanine synthetase A | NC_014475.1.orf3.gen | Protein | 2e-62 | 44 |
| Csac_1372 | YP_001180165.1 | D-alanyl-alanine synthetase A | AF130997.1.orf4.gene | Protein | 2e-59 | 44 |
| Csac_1372 | YP_001180165.1 | D-alanyl-alanine synthetase A | AY145441.gene.p01 | Protein | 7e-60 | 43 |
| Csac_1372 | YP_001180165.1 | D-alanyl-alanine synthetase A | U35369.1.gene6.p01 | Protein | 3e-60 | 43 |
| Csac_1372 | YP_001180165.1 | D-alanyl-alanine synthetase A | AE016830.1.gene2250. | Protein | 3e-60 | 43 |
| Csac_1372 | YP_001180165.1 | D-alanyl-alanine synthetase A | AF310956.2.orf5.gene | Protein | 7e-60 | 43 |
| Csac_1372 | YP_001180165.1 | D-alanyl-alanine synthetase A | U00456.gene.p01 | Protein | 3e-60 | 43 |
