Gene Information

Name : Csac_1273 (Csac_1273)
Accession : YP_001180067.1
Strain : Caldicellulosiruptor saccharolyticus DSM 8903
Genome accession: NC_009437
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : 3.1.1.3
Position : 1437385 - 1438140 bp
Length : 756 bp
Strand : +
Note : TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein

DNA sequence : 
ATGAAAAAGAGGCTTCTTAATATTTTATCGACAGGTTTTATTATTTTGATAATAACTTTTTTCAAAAATGAGATAGCAGC
TGCTTCAGCAAGCTTCAGTCTCAATTTAGGCGATATGAACAATCCAAGAGATGTGTCTTCAGCCATACAACTTATAATAT
TCCTCACAATACTCACTTTAGCACCTTCAATTCTCATTATGATGACATCGTTTACCAGGATATTGATTGTGCTGGGATTT
GTAAGAAATGCGTTAGGAACTCAGCAAATGCCACCAAACCAGATTTTAATTGGTCTTGCACTATTTTTGACATTCTTTAT
AATGGCGCCTGTAGGAGAGAGGATTTATACACAGAGTTATCTGCCATACATAAAGGGTCAGATTACGTCCCAAGAAGCGC
TAAAAAGGGCAGAGGCACCAATTAAAGAGTTCATGCTCAAAAATACGCGAAAAAAAGATTTAGATCTTTTTATAAAGCTC
AGCAATACAAATCCAACTACAAACGTTAGGAATTTACCTTTAAGAGTTGTAATTCCGGCCTTTATTATAAGTGAGCTCAA
AAGTGCATTTGAAATGGGGTTTATAATTTATGTGCCATTTTTGATTATTGACATGGTTGTTGCAAGTATTTTGATGTCTA
TGGGAATGCTCATGATTCCTCCTGTTATGATTTCTCTGCCGTTCAAGATTTTGCTTTTTATACTCGTTGATGGTTGGGGA
CTTGTTGTTGAGTCACTTATTAAAAGTTTCAAATAA

Protein sequence : 
MKKRLLNILSTGFIILIITFFKNEIAAASASFSLNLGDMNNPRDVSSAIQLIIFLTILTLAPSILIMMTSFTRILIVLGF
VRNALGTQQMPPNQILIGLALFLTFFIMAPVGERIYTQSYLPYIKGQITSQEALKRAEAPIKEFMLKNTRKKDLDLFIKL
SNTNPTTNVRNLPLRVVIPAFIISELKSAFEMGFIIYVPFLIIDMVVASILMSMGMLMIPPVMISLPFKILLFILVDGWG
LVVESLIKSFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 2e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csac_1273 YP_001180067.1 flagellar biosynthetic protein FliP VFG2338 Protein 4e-57 56
Csac_1273 YP_001180067.1 flagellar biosynthetic protein FliP VFG1259 Protein 8e-56 56
Csac_1273 YP_001180067.1 flagellar biosynthetic protein FliP VFG2494 Protein 5e-57 55
Csac_1273 YP_001180067.1 flagellar biosynthetic protein FliP VFG2016 Protein 6e-51 54
Csac_1273 YP_001180067.1 flagellar biosynthetic protein FliP VFG0044 Protein 5e-37 41