Gene Information

Name : Csac_1036 (Csac_1036)
Accession : YP_001179841.1
Strain : Caldicellulosiruptor saccharolyticus DSM 8903
Genome accession: NC_009437
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1167509 - 1168399 bp
Length : 891 bp
Strand : +
Note : TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein

DNA sequence : 
ATGAGTGAGGTTGTAAATGAAAGATATGAACTCAACAAAAACCTTGCCCAGATGCTAAAAGGTGGTGTTATTATGGATGT
AACATCACCAAGGGAGGCAGAGATTGCAGAAAAAGCAGGTGCTGTTGCTGTAATGGCCCTTCAAAAGGTCCCAGCTGACC
TAAGAAAAGAAGGCAAGGTTGCGCGTATGGCGGACCCAAAGATTATCTTGGAGATAAAAAGTGCTGTTTCAATTCCAGTT
ATGGCAAAGGTGCGAATTGGTCATTTTGTTGAGGCACAGATTTTAGAAGCGTTAGGTATTGACTATATAGATGAGAGCGA
GGTTTTGACACCTGCTGATGAGGAGCACCATATTGACAAGTGGAAATTTAAAGCTGCTTTTGTATGTGGTGCAAGGGATT
TAGGAGAGGCACTCAGAAGAATCCAAGAAGGTGCGTCCATGATACGAACAAAAGGTGAGGCTGGAACAGGAAATGTTGTT
GAGGCGGTAAGACACTTAAGAAGAATTAACAAACAGATTGCATACGCAGCATCTTTAAATGAGGATGAGCTTTATGCATA
TGCAAAGGAATTAGGTGTATCATATGAGCTTTTGAAAAAAACTGCTGAGCTAAAAAGACTTCCTGTTGTAAACTTTGCAG
CAGGTGGAATTGCAACACCGGCTGACGCAGCTTTAATGATGCAGCTTGGAGCAGATGGTGTATTTGTTGGCTCTGGAATA
TTTAAGTCGAAAAACCCAGAAAAAAGAGCAAGAGCAATTGTAATGGCAACAACATACTACAATGACCCTAAAATCTTAGC
AGAGATTTCTTATGACCTTGGTGAAGAGATGGAAGGAATTGATTTAAGAGGTCTTTCACAAAATGAACTTTTGCAGTTTA
GGGGGAATTAA

Protein sequence : 
MSEVVNERYELNKNLAQMLKGGVIMDVTSPREAEIAEKAGAVAVMALQKVPADLRKEGKVARMADPKIILEIKSAVSIPV
MAKVRIGHFVEAQILEALGIDYIDESEVLTPADEEHHIDKWKFKAAFVCGARDLGEALRRIQEGASMIRTKGEAGTGNVV
EAVRHLRRINKQIAYAASLNEDELYAYAKELGVSYELLKKTAELKRLPVVNFAAGGIATPADAALMMQLGADGVFVGSGI
FKSKNPEKRARAIVMATTYYNDPKILAEISYDLGEEMEGIDLRGLSQNELLQFRGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 9e-78 64
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-77 64
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-77 63