Gene Information

Name : ribD (Ent638_0882)
Accession : YP_001175617.1
Strain : Enterobacter sp. 638
Genome accession: NC_009436
Putative virulence/resistance : Unknown
Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 982382 - 983485 bp
Length : 1104 bp
Strand : +
Note : riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine a

DNA sequence :
ATGCAGGATGAGATTTACATGGCGCGCGCGCTGAAACTTGCGCAGCGTGGACGGTTCACAACCCATCCCAATCCCAACGT
TGGCTGCGTTATCGTCAAAGACGGCGTAATTGTCGGCGAAGGATTCCACTATCGCGCCGGTGAACCTCATGCCGAAGTCC
ACGCTTTGCGTATGGCGGGCGAAAAGGCGCGGGGTGCCACGGCCTATGTCACGCTTGAACCCTGTAGCCATCATGGGCGA
ACGCCGCCGTGCTGCGAGGCGCTGATTGATGCCGGCGTGGCGCGCGTTGTCGCTGCGATGCAAGATCCCAATCCTCAGGT
TGCCGGACGCGGCCTGTATCGCCTGCAGCAGGAAGGGATCGACGTCAGCCATGGCTTGATGATGGCTGATACAGAAGCAC
TTAATAAGGGCTTCCTCAAACGCATGCGTACCGGTTTCCCCTATATTCAGTTAAAGCTCGGTGCTTCGCTTGATGGCCGA
ACGGCGATGGCAAACGGTGAAAGCCAGTGGGTAACCTCACCGCAATCAAGGCGCGATGTGCAACGTCTGCGTGCGCAAAG
CCATGCTATTCTCACCAGCAGCGAAACGGTTTTGGCTGATGATCCTGCCATGACTGTGCGCTGGGACGAACTGAATCAGG
ATACGCAGGCGCTTTATCCGCAAGAGAATTTGCGTCAGCCGCTGCGAATTGTGATTGATAGCCAGAACCGCGTCACCCCT
GCGCATCGTATCGTGCAGCAACCTGGTGAAACGCTTTTTGCGCGCACAAAAGAAGACGATCGCCAGTGGCCAGAACATGT
GCGCAGCATTATGGTGCCGGAGCACAAAGGTCATCTCGATTTAGTCGTCCTGATGATGCTACTCGGCAAACAGCAGGTCA
ACAGTATCTGGGTTGAGGCGGGTCCGACGCTTGCGGGCGCGCTATTACAGGCAGGGCTTGTGGATGAACTGATCGTCTAC
GTAGCGCCTAAATTATTAGGTCACGAGGCGCGTGGCTTGTTTGCTCTGCCTGGTCTCGAAAAACTGGCTGATGCGCCGCA
ACTCAAATTCAGCGACATTCGCCCGGTCGGTCCGGATGTTTGTCTGCATTTAACACCTTTGTAA

Protein sequence :
MQDEIYMARALKLAQRGRFTTHPNPNVGCVIVKDGVIVGEGFHYRAGEPHAEVHALRMAGEKARGATAYVTLEPCSHHGR
TPPCCEALIDAGVARVVAAMQDPNPQVAGRGLYRLQQEGIDVSHGLMMADTEALNKGFLKRMRTGFPYIQLKLGASLDGR
TAMANGESQWVTSPQSRRDVQRLRAQSHAILTSSETVLADDPAMTVRWDELNQDTQALYPQENLRQPLRIVIDSQNRVTP
AHRIVQQPGETLFARTKEDDRQWPEHVRSIMVPEHKGHLDLVVLMMLLGKQQVNSIWVEAGPTLAGALLQAGLVDELIVY
VAPKLLGHEARGLFALPGLEKLADAPQLKFSDIRPVGPDVCLHLTPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-64 47
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-64 47