Gene Information

Name : Ent638_0724 (Ent638_0724)
Accession : YP_001175462.1
Strain : Enterobacter sp. 638
Genome accession: NC_009436
Putative virulence/resistance : Virulence
Product : L-lysine decarboxylase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1982
EC number : 4.1.1.18
Position : 825168 - 827306 bp
Length : 2139 bp
Strand : +
Note : PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: stm:STM0234 lysine decarboxylase 2

DNA sequence :
GTGAATATTATTGCAATTATGGGGCCGCACGGCGTCTTTTATAAAGATGAGCCCATCAAGGAGCTGGAACAGGCATTGCA
GGCGCGCGGGTATCAACTTATCTGGCCGCATAATAATGCCGATCTGCTGAAGTTTATCGAACACAATCCGCGAATCTGTG
GCGTGATTTTTGACTGGGATGAGTACGACCTCGAACTGTGCAGTGATATCAATCAGCTGAATGAATACCTGCCGCTGTAC
GCTTTCATCAACACGCATTCGACGATGGATGTCAGTGCCCACGATATGCGTATGGCGCTGTGGTTTTTTGAATACGCATT
GGGTGCTGCAGAAGATATTGCGACCCGCATTCAGCAATACACGCGCGAATACCTCGACAATATTACCCCGCCGTTTACCC
GCGCGCTTTTCACCTACGTTCAGGAAGGTAAATACACGTTTTGCACGCCGGGTCACATGGCGGGAACCGCCTATCAGAAA
AGCCCTGTGGGTTGCCTGTTTTACGATTTTTTTGGTGGGAATACGCTCAAAGCTGACGTATCGATTTCGGTGACGGAAAT
GGGCTCGCTGCTTGATCACACCGGCCCGCACCTGGAGGCCGAAGAGTACATTGCACGTACTTTTGGTGCAGAGCAGAGCT
ATATGGTGACTAACGGTACCTCGACTTCTAACAAGATTGTTGGGATGTATGCCGCCACCGCTGGAAGTACGCTGCTGATT
GACCGTAACTGCCACAAATCACTGGCGCATTTACTGATGATGAGTGATGTTGTGCCGCTCTGGCTCTCGCCAACACGAAA
TGCGCTGGGGATTTTGGGCGGGATCCCTCGTCGTGAATTCTCCCGCGCCGCCATTGAACATAAAGTCGCAGCGATTCCTG
ACGCAAGCTGGCCGATTCACGCGGTGATTACTAACTCGACGTATGATGGCCTGCTGTATAACACCAACTGGATCAAGCAG
ACTCTTGATGTTCCTTCGATTCATTTCGATTCTGCATGGGTACCCTATACCAATTTCCACCCTATTTACGCCGGTAAAAG
CGGTATGAGTGGTGAGCGCGTACCGGGCAAAGTGTTCTTCGAGACGCAATCGACGCACAAAATGCTGGCCGCCTTATCTC
AGGCGTCGTTAATCCATATTAAGGGTGAATACGACGAAGAGACGTTCAACGAAGCTTATATGATGCACACCACCACATCA
CCGAGTTATCCATTAGTCGCATCAATCGAAACGGCAGCGGCGATGCTGCGCGGCAATCCGGGAAAACGGCTGATAAACCG
TTCGGTGGAACGGGCACTCCATTTCCGTAAGGAAGTTCAGCGCCTGAAAGATGAAGCCGACGGCTGGTTCTTCGATATCT
GGCAACCGGAAGAGATTGATGAGGCGGAATGCTGGTCTGTCGCGCCAGGCGAGAGCTGGCACGGTTTCAGAGAGGCTGAC
GCGGACCATATGTTTCTTGATCCGGTCAAAGTCACCATTCTGACGCCGGGGATGGATGAACAGGGAACGATGAGTGATGA
AGGGATTCCGGCCGCGCTGGTGGCAAAATTCCTCGATGAACGCGGCGTCGTGGTGGAAAAAACCGGCCCTTACAATCTGC
TTTTCCTGTTCAGCATAGGTATCGATAAGACCCGAGCGATGGGCCTGTTACGCGGACTCATGGAATTTAAGCGCGCTTAC
GATCTCAATCTGCGGGTCAAAAATATGCTCCCGGATCTGTATGCCGAAGATCCTGACTATTACCGGAATATGCGGATTCA
GGATCTGGCGCAAGGGATCCATAAGCTGATCCGCCAGCACGATCTTCCTCGGCTGATGCTCCAGGCGTTTGACGTATTGC
CGGAAATGAAACTCACGCCGCACAAGGCCTGGCAGCAGCAGGTCAAAGGTGAAGTGGAAACCATTGAGCTGGAAAATCTC
ATTGGGCGCGTATCCGCAAATATGGTTCTCCCTTATCCACCGGGCGTCCCGCTTTTGATGCCGGGAGAAATGATCACCGA
ACAAAGCCGGTCGGTGCTCGATTTTCTGCTGATGCTCTGTTCTATTGGCCGCCATTATCCTGGCTTTGAGACGGACATTC
ATGGTGCAAAACGCGATGAGAATGGCGTCTACCGGGTACGAGTCTTAAAAGCGTGTTGA

Protein sequence :
MNIIAIMGPHGVFYKDEPIKELEQALQARGYQLIWPHNNADLLKFIEHNPRICGVIFDWDEYDLELCSDINQLNEYLPLY
AFINTHSTMDVSAHDMRMALWFFEYALGAAEDIATRIQQYTREYLDNITPPFTRALFTYVQEGKYTFCTPGHMAGTAYQK
SPVGCLFYDFFGGNTLKADVSISVTEMGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAATAGSTLLI
DRNCHKSLAHLLMMSDVVPLWLSPTRNALGILGGIPRREFSRAAIEHKVAAIPDASWPIHAVITNSTYDGLLYNTNWIKQ
TLDVPSIHFDSAWVPYTNFHPIYAGKSGMSGERVPGKVFFETQSTHKMLAALSQASLIHIKGEYDEETFNEAYMMHTTTS
PSYPLVASIETAAAMLRGNPGKRLINRSVERALHFRKEVQRLKDEADGWFFDIWQPEEIDEAECWSVAPGESWHGFREAD
ADHMFLDPVKVTILTPGMDEQGTMSDEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIGIDKTRAMGLLRGLMEFKRAY
DLNLRVKNMLPDLYAEDPDYYRNMRIQDLAQGIHKLIRQHDLPRLMLQAFDVLPEMKLTPHKAWQQQVKGEVETIELENL
IGRVSANMVLPYPPGVPLLMPGEMITEQSRSVLDFLLMLCSIGRHYPGFETDIHGAKRDENGVYRVRVLKAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 69
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ent638_0724 YP_001175462.1 L-lysine decarboxylase VFG1670 Protein 0.0 59