Gene Information

Name : Ent638_0060 (Ent638_0060)
Accession : YP_001174801.1
Strain : Enterobacter sp. 638
Genome accession: NC_009436
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 77566 - 78108 bp
Length : 543 bp
Strand : +
Note : PFAM: Integrase, catalytic region; KEGG: sfv:SFV_0556 ISEhe3 orfB

DNA sequence :
GTGTCGCCCAACAGGATCCAGCGACAGTTCAATCCGGATGCTCCGGATGAGCGTTGGGTAACGGACATAACCTACATCAG
GACTCACGAAGGCTGGCTGTATCTGGCCGTGGTGGTTGACCTGTTCTCACTCAAAATTATCGGCTGGTCAATGCAATCCC
GGATGACAAAGGACATTGTCCTGAACGCAATGCTGATGGCTGTATGGCGGCGTAATCCGCAAAGATCGGTGCTGGTTCAC
TCGGACCAGGGCAGTCAGTACACAAGCCATGAATGGCAGTCGTTCCTGAAATCACAAGGCTTGGAAGGGAGTATGAGCCG
TCGCGGTAACTGTCACGATAACGCGGTTGCAGAAAGCTTTTTCCAGTTACTGAAACGCGAGCGAATAAAGAAAAAGATCT
ACGGAACGCGGGAAGAAGCACGCAGCGATATTTTTGATTACATCGAAATGTTTTATAACAGTAAGCGTCGGCATGGTTCG
AGCAATCAGATGTCACCGACAGAATATGAAAACCAGTATTATCAACGGCTCGAAAGTGTCTAG

Protein sequence :
MSPNRIQRQFNPDAPDERWVTDITYIRTHEGWLYLAVVVDLFSLKIIGWSMQSRMTKDIVLNAMLMAVWRRNPQRSVLVH
SDQGSQYTSHEWQSFLKSQGLEGSMSRRGNCHDNAVAESFFQLLKRERIKKKIYGTREEARSDIFDYIEMFYNSKRRHGS
SNQMSPTEYENQYYQRLESV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAD44733.1 TnpA Not tested SHI-2 Protein 2e-37 50
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 5e-27 44
unnamed AAC31485.1 L0006 Not tested LEE Protein 3e-27 44
unnamed CAI43898.1 putative transposase Not tested LEE Protein 1e-28 44
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 1e-28 44
Z5089 NP_290241.1 transposase Not tested LEE Protein 5e-27 44
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 3e-27 44
CDC7B_2039 YP_005163480.1 transposase-like protein Not tested Not named Protein 9e-21 43
CDCE8392_1961 YP_005134492.1 transposase-like protein Not tested Not named Protein 9e-21 43
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 2e-26 41
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ent638_0060 YP_001174801.1 integrase catalytic subunit VFG0785 Protein 1e-27 44
Ent638_0060 YP_001174801.1 integrase catalytic subunit VFG1484 Protein 6e-27 41