|
Name : lysS (Ent638_3308) Accession : YP_001178023.1 Strain : Enterobacter sp. 638 Genome accession: NC_009436 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 3611754 - 3613271 bp Length : 1518 bp Strand : - Note : class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA DNA sequence : ATGTCTGAACAACAAGCACAGGGCACTGACGCGGTAGTCGATCTTAATAACGAGCTGAAAACACGTCGCGAAAAGCTGGC TGCACTGCGTGAGCAGGGTATTCCATTCCCGAACGATTTTCGTCGCGATCACACTTCCGATCAGCTGCATGCTGACTTCG ATGCAAAAGAAAACGAAGAGCTGGAAGCGCTGAACGTAGAAGTGTCCGTTGCAGGCCGCATGATGACCCGCCGTATCATG GGTAAAGCGTCCTTCGTGACGTTGCAGGACGTCGGTGGTCGTATTCAGCTGTACGTTTCCCGCGACGATCTGCCAGAAGG CATTTATAACGAGCAGTTCAAAAAGTGGGACCTGGGCGACATCCTTGGCGCGAAAGGCAAGCTGTTCAAGACCAAGACGG GTGAACTCTCTATTCACTGCACCGAACTGCGCCTGCTGACCAAAGCGCTGCGTCCGTTGCCGGATAAATTCCACGGTCTG CAGGATCAGGAAGCGCGCTATCGCCAGCGCTACCTGGATCTCATCTCTAACGATGAATCCCGCAAAACGTTCAAAATCCG TTCCCAGATTATGGCGGGCATCCGTCAGTTCATGGTTGGCCGTGATTTTATGGAAGTCGAAACGCCAATGATGCAGGTGA TTCCGGGTGGTGCTTCTGCGCGTCCGTTCGTCACCCATCACAATGCGCTGGATCTCGACATGTACCTGCGCATCGCGCCG GAACTGTACCTGAAGCGTCTGGTGGTTGGTGGCTTCGAACGCGTGTTCGAAATCAACCGTAACTTCCGTAACGAAGGTAT TTCCGTTCGCCATAACCCAGAGTTCACCATGATGGAACTCTATATGGCGTACGCGGATTACAAAGATCTGATCGAGCTGA CCGAGTCTCTGTTCCGCACCCTGGCGCAGAATATTCTGGGCACCACGGAAGTGCCTTACGGCGACGAAGTGTTCGACTTT GGTAAGCCGTTCGTGAAGCTGACCATGCGCGAAGCGATCAAGAAATACCGTCCAGAAACCGAAATGGCCGATCTGGATAA CTACGATTCTGCGAAAGCCATCGCGGAAAGCATCGGTATCAAAGTTGAGAAGAGCTGGGGTCAGGGTCGTATCGTGACTG AGATCTTCGAAGAAGTGGCAGAAGCGCATCTGATTCAGCCAACCTTCATCACCGAATACCCTGCTGAAGTGTCTCCACTG GCGCGTCGTAATGACGAAAACCCGGAAATCACTGACCGCTTTGAGTTCTTCATCGGTGGCCGCGAAATCGGTAACGGCTT TAGCGAGCTGAACGATGCGCAGGATCAGGCGCAGCGCTTCCAGGATCAGGTTGATGCGAAAGCAGCAGGCGACGATGAAG CGATGTTCTTCGACGAAGACTACGTGACTGCCCTGGAACACGGCTTGCCGCCAACGGCGGGTCTGGGTATTGGTATCGAC CGTATGGTGATGCTGTTTACCAATAGCCACACCATCCGTGATGTGATCCTGTTCCCGGCGATGCGTCCGGTAAAATAA Protein sequence : MSEQQAQGTDAVVDLNNELKTRREKLAALREQGIPFPNDFRRDHTSDQLHADFDAKENEELEALNVEVSVAGRMMTRRIM GKASFVTLQDVGGRIQLYVSRDDLPEGIYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL QDQEARYRQRYLDLISNDESRKTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFVTHHNALDLDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNILGTTEVPYGDEVFDF GKPFVKLTMREAIKKYRPETEMADLDNYDSAKAIAESIGIKVEKSWGQGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPL ARRNDENPEITDRFEFFIGGREIGNGFSELNDAQDQAQRFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-159 | 69 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 7e-87 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_001178023.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-159 | 69 |
