Gene Information

Name : Ent638_3101 (Ent638_3101)
Accession : YP_001177816.1
Strain : Enterobacter sp. 638
Genome accession: NC_009436
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 3375316 - 3376503 bp
Length : 1188 bp
Strand : +
Note : PFAM: phage integrase family protein; KEGG: ypn:YPN_2899 prophage integrase

DNA sequence : 
ATGGCGCGGATCACACGCCCCCTAACTAACAACGAAATTCTTAAAGCTAAACCTCGCGAAAAAGACTTTACCCTCCATGA
TGGGGACGGCTTGTTCTTACTCGTCAAAACCTCTGGTAAAAAACTCTGGCGTTTTCGCTACCAGCGACCAAACAGCACCA
GCCGTACAAATCTCAGCCTTGGCGCATATCCTGCCCTTACGCTTGCAGCAGCCCGTCTGATACGCGATCAGCATTTGTCT
CTCTTAGCACAGGACATAGATCCTCAGCAGCAACAAGAAATAGTCTCAGAACAGCGCCAAATAAAGCTGGACAGCGTTTT
CTCTACAGTTGCCGCCAATTGGTTCCAGCTAAAGAGCAAAAGCGTAACACCGGATTATGCAAAAGACATTTGGCGCTCAT
TAGATAAAGACGTGTTCCCTGCTATTGGCGAGATACCAGTTCAAGAGATCAAAGCCAGAACTATTATTGAAGCGCTTGAG
CCTATCAAAGCGCGTGGAGCACTGGAAACAGTTCGTCGTCTTGTACAGCGTATCAATGAGATTATGATTTATGCGGTAAA
TACCGGCTTGCTTGATGCCAACCCAGCGTCAGGGGTTGGAATGGCTTTTGAGAGACCCAAGAAGCAAAATATGCTTACGC
TTCGACCAGAAGAATTGCCCAAGCTGATGCGTTCAATAGGCATGTCAAATCTGTCTGTTCCAACTCGCTGCCTAATCGAA
TTGCAGCTCCTCACCCTTGTTCGCCCTTCAGAAGCTTCTGGTGCTCGATGGGCAGAGATTGATATCGATGCAAAGCTTTG
GAAAATCCCAGCAGAACGGATGAAAGCGAAGCGTGAACACATTGTACCTTTATCTCCTCAGGCGTTAGAGATTCTAGAGA
TTATGACGCCTATCAGTGCGCATCGCGAGTATGTGTTTCCAAGCAGGAATGATCCAAAGCAACCCATGAATAGCCAGACG
GCTAATGCGGCTATAAAGCGTATTGGCTATGGAGGCCGTCTAGTTGCACATGGTCTTCGTTCTATCGCAAGTACAGCGAT
GAATGAGGAAGGATTTAATCCTGATGTTATTGAAGCGGCATTAGCCCATAGTGATAAAAATGAAGTTCGTCGAGCATATA
ATAGATCTACATACCTTGAAGCACGGAGAGAACTAATGGATTGGTGGGGTTCAGCCATATACAAATAA

Protein sequence : 
MARITRPLTNNEILKAKPREKDFTLHDGDGLFLLVKTSGKKLWRFRYQRPNSTSRTNLSLGAYPALTLAAARLIRDQHLS
LLAQDIDPQQQQEIVSEQRQIKLDSVFSTVAANWFQLKSKSVTPDYAKDIWRSLDKDVFPAIGEIPVQEIKARTIIEALE
PIKARGALETVRRLVQRINEIMIYAVNTGLLDANPASGVGMAFERPKKQNMLTLRPEELPKLMRSIGMSNLSVPTRCLIE
LQLLTLVRPSEASGARWAEIDIDAKLWKIPAERMKAKREHIVPLSPQALEILEIMTPISAHREYVFPSRNDPKQPMNSQT
ANAAIKRIGYGGRLVAHGLRSIASTAMNEEGFNPDVIEAALAHSDKNEVRRAYNRSTYLEARRELMDWWGSAIYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 3e-104 53
int AAK20773.1 integrase Not tested VPI Protein 2e-104 53
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 3e-104 53
int AAK20803.1 integrase Not tested VPI Protein 2e-104 53
unnamed AAA82714.1 integrase Not tested VPI Protein 2e-104 53
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 2e-102 51
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 3e-89 48
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 2e-88 48
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 2e-88 48
int AAD44730.1 Int Not tested SHI-2 Protein 3e-70 42
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 2e-67 41
int AAC31482.1 CP4-like integrase Not tested LEE Protein 1e-67 41
ECs4534 NP_312561.1 integrase Not tested LEE Protein 2e-67 41
int ACU09430.1 integrase Not tested LEE Protein 1e-67 41
int CAC39282.1 integrase Not tested LPA Protein 5e-69 41
aec33 AAW51716.1 Int Not tested AGI-3 Protein 4e-69 41
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 4e-69 41
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 4e-69 41
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 3e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ent638_3101 YP_001177816.1 phage integrase family protein VFG1092 Protein 7e-89 48
Ent638_3101 YP_001177816.1 phage integrase family protein VFG0783 Protein 8e-68 41
Ent638_3101 YP_001177816.1 phage integrase family protein VFG0598 Protein 2e-69 41