Gene Information

Name : fliP (Ent638_2539)
Accession : YP_001177259.1
Strain : Enterobacter sp. 638
Genome accession: NC_009436
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2735804 - 2736541 bp
Length : 738 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence :

ATGCGCCGTTTGTTGTCCCTTACGCTTGCAGGCCTCGTCCTGTTTGCTCCCGCCGTGTATGCGCAATTACCAGGCTTGAT
TTCCACACCGATGGCTGGAGGAGGACAAAGCTGGTCTTTGCCGGTGCAGACTCTGGTCTTTATTACCTCGCTGACGTTTA
TCCCGGCTATTTTGCTGATGATGACCAGCTTTACGCGCATCATCATCGTCTTTGGTTTGTTGCGAAACGCGCTGGGTACA
CCGTCCGCGCCGCCTAACCAGGTGCTGCTCGGTTTAGCACTGTTTCTGACCTTCTTTATCATGTCGCCGGTCATCGATAA
GATTTATGCCGACGCCTATCAGCCGTTCAGTGAAGATAAAATTTCCATGCAGGTGGCGCTGGAAAAAGGCGCGCAGCCGC
TGCGTGAATTTATGCTGCGTCAGACTCGCGAGGCGGATCTTGCGCTGTTTGCCCGTCTGGCTAACGAAGGCCCGATTCAG
GGACCTGAAGCCGTGCCGATGCGCATTTTGCTGCCGGCCTACGTCACCAGCGAATTGAAAACGGCCTTCCAGATTGGTTT
TACTATCTTTATCCCGTTCCTGATTATCGACCTGGTGATCGCCAGCGTGTTAATGGCCTTAGGTATGATGATGGTGCCCC
CTGCTACCATTGCCCTGCCCTTTAAGATAATGCTTTTCGTACTGGTAGATGGCTGGCAATTGCTTGTCGGGTCGCTGGCG
CAAAGTTTCTACAGTTGA

Protein sequence :

MRRLLSLTLAGLVLFAPAVYAQLPGLISTPMAGGGQSWSLPVQTLVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGT
PSAPPNQVLLGLALFLTFFIMSPVIDKIYADAYQPFSEDKISMQVALEKGAQPLREFMLRQTREADLALFARLANEGPIQ
GPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKIMLFVLVDGWQLLVGSLA
QSFYS

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
ECs4583	NP_312610.1	type III secretion system protein	Virulence	LEE	Protein	2e-30	44
escR	AFO66317.1	putative LEE-encoded type III secretion system factor	Virulence	SESS LEE	Protein	3e-29	43
escR	AFO66400.1	putative LEE-encoded type III secretion system factor	Virulence	SESS LEE	Protein	3e-29	43
escR	ACU09473.1	type III secretion system protein EscR	Virulence	LEE	Protein	3e-31	43
escR	AAK26700.1	EscR	Virulence	LEE	Protein	3e-31	43
escR	YP_003236103.1	T3SS structure protein EscR	Virulence	LEE	Protein	4e-31	43
escR	AAL57527.1	EscR	Virulence	LEE	Protein	3e-31	43
escR	NP_290283.1	type III secretion system protein	Virulence	LEE	Protein	4e-31	43
escR	CAC81847.1	EscR protein	Virulence	LEE II	Protein	3e-31	43
escR	YP_003223490.1	T3SS structure protein EscR	Virulence	LEE	Protein	4e-31	43
escR	CAI43889.1	EscR protein	Virulence	LEE	Protein	3e-31	43
escR	YP_003232138.1	type III secretion system protein	Virulence	LEE	Protein	4e-31	43
escR	AAC31528.1	L0049	Virulence	LEE	Protein	3e-31	43
hrcR	AAT96303.1	HrcR	Virulence	S-PAI	Protein	1e-26	42
hrcR	AAT96343.1	HrcR	Virulence	S-PAI	Protein	1e-26	42
hrcR	AAT96262.1	HrcR	Virulence	S-PAI	Protein	1e-26	42
escR	AAC38369.1	EscR	Virulence	LEE	Protein	2e-30	42
hrcR	AAP34349.1	HrcR	Virulence	Hrp PAI	Protein	3e-32	41
hrcR	AAT96200.1	HrcR	Virulence	T-PAI	Protein	4e-23	41
hrcR	AAT96146.1	HrcR	Virulence	T-PAI	Protein	4e-23	41
YPO0270	YP_002345352.1	type III secretion system protein	Virulence	Not named	Protein	2e-30	41
lscR	AAO18040.1	LscR	Virulence	TTSS locus	Protein	8e-30	41
unnamed	AAL06354.1	EscR	Virulence	LEE	Protein	3e-30	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fliP	YP_001177259.1	flagellar biosynthesis protein FliP	VFG2338	Protein	1e-91	86
fliP	YP_001177259.1	flagellar biosynthesis protein FliP	VFG2494	Protein	2e-74	67
fliP	YP_001177259.1	flagellar biosynthesis protein FliP	VFG1259	Protein	5e-65	61
fliP	YP_001177259.1	flagellar biosynthesis protein FliP	VFG2016	Protein	2e-60	56
fliP	YP_001177259.1	flagellar biosynthesis protein FliP	VFG0188	Protein	4e-33	43
fliP	YP_001177259.1	flagellar biosynthesis protein FliP	VFG0827	Protein	2e-31	43
fliP	YP_001177259.1	flagellar biosynthesis protein FliP	VFG0715	Protein	1e-30	42
fliP	YP_001177259.1	flagellar biosynthesis protein FliP	VFG0044	Protein	7e-34	41
fliP	YP_001177259.1	flagellar biosynthesis protein FliP	VFG0394	Protein	2e-30	41