Gene Information

Name : fliI (Ent638_2532)
Accession : YP_001177252.1
Strain : Enterobacter sp. 638
Genome accession: NC_009436
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 2730380 - 2731750 bp
Length : 1371 bp
Strand : +
Note : involved in type III protein export during flagellum assembly

DNA sequence :
ATGACAGCCCGACTCACGCGTTGGTTAAACACGCTCGATAACTTCGAAGCGAAAATGGCGCAACTGCCTTCCGTGCGTCG
TTATGGTCGTCTGACCCGCGCAACCGGTCTGGTACTGGAAGCCACCGGCTTACAGCTCCCGCTCGGTGCAACCTGCGTGA
TTGAACGTCAGGATGGTAACGACACGCAAGAAGTCGAAAGCGAAGTCGTGGGCTTTAACGGCCAACGCCTGTTTTTGATG
CCGCTGGAAGAAGTCGAAGGCATTTTGCCCGGTGCGCGCGTGTACGCCAAAAATAATTCCGGCGACGGACTGCACAGCGG
CAAGCAATTGCCACTCGGTCCAGCGCTGCTAGGTCGTGTCCTGGATGGCGCAGGCAAACCGCTTGATGGCCTGCCCTCCC
CTGATACCACCGAAACCGGCGCGCTGATCACTCAGCCGGTTAACCCGCTGCAACGTACGGCAATCGAACATGTGCTTGAT
ACCGGCGTGCGTCCGATTAACGCCCTGCTGACGGTCGGTCGTGGTCAGCGTATGGGTCTGTTTGCCGGTTCAGGTGTCGG
TAAATCCGTCCTTCTCGGCATGATGGCGCGTTACACGCAGGCGGATGTGATCGTCGTAGGCCTGATTGGCGAGCGTGGTC
GTGAAGTGAAAGACTTTATCGAGAACATTCTCGGTGCAGAAGGCCGTGCGCGTTCCGTGGTGATCGCCGCGCCAGCGGAC
GTTTCTCCGCTGCTGCGTATGCAGGGTGCGGCTTACGCCACGCGCATTGCAGAAGATTTCCGCGACCGCGGCCAACACGT
CCTGCTGATTATGGATTCCCTGACGCGTTATGCGATGGCTCAGCGTGAAATCGCGCTCGCCATCGGTGAACCGCCGGCGA
CCAAAGGCTATCCGCCATCCGTGTTTGCCAAACTTCCGGCGCTGGTTGAGCGTGCGGGGAACGGAATTACCGGTGGCGGT
TCCGTAACCGCGTTTTATACGGTGCTGACCGAAGGCGATGACCAGCAGGACCCCATTGCTGACTCCGCGCGAGCGATTCT
TGATGGCCACATTGTGCTGTCGCGTCGTCTGGCGGAAGCCGGTCACTATCCGGCGATTGATATCGAAGCGTCCATCAGCC
GTGCCATGACCTCGCTTATCACGGAAAAGCACTACGCCCGCGTGCGTAACTTTAAACAACTTCTTTCAAGTTTCCAGCGT
AACCGCGACCTGGTGAGCGTGGGCGCGTATGCCAAAGGCAGCGATCCGATGCTCGACAAGGCCATTGCCGTTTGGCCACA
GCTGGAAGCTTTCTTGCAACAAGGTATTTTTGAACGTGCCGACTGGGAAGACTCAACGCAAGCGTTAGAGCTTATTTTCC
CGCAGGTGTAA

Protein sequence :
MTARLTRWLNTLDNFEAKMAQLPSVRRYGRLTRATGLVLEATGLQLPLGATCVIERQDGNDTQEVESEVVGFNGQRLFLM
PLEEVEGILPGARVYAKNNSGDGLHSGKQLPLGPALLGRVLDGAGKPLDGLPSPDTTETGALITQPVNPLQRTAIEHVLD
TGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPAD
VSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGITGGG
SVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTSLITEKHYARVRNFKQLLSSFQR
NRDLVSVGAYAKGSDPMLDKAIAVWPQLEAFLQQGIFERADWEDSTQALELIFPQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-83 49
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-83 48
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-84 48
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 3e-84 48
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 3e-84 48
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-84 48
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 6e-84 48
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-78 48
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-81 47
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-81 47
lscN AAO18044.1 LscN Virulence TTSS locus Protein 9e-76 47
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-69 47
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-69 47
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-69 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-69 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-69 47
escN AAC38383.1 EscN Virulence LEE Protein 4e-73 45
escN AAC31513.1 L0034 Virulence LEE Protein 3e-73 45
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-73 45
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-73 45
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-73 45
escN YP_003236088.1 translocator EscN Virulence LEE Protein 3e-73 45
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-70 44
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-73 44
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-73 44
escN CAI43874.1 EscN protein Virulence LEE Protein 6e-73 44
unnamed AAL06369.1 EscN Virulence LEE Protein 4e-71 44
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-72 44
escN YP_003223475.1 translocator EscN Virulence LEE Protein 8e-73 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-72 43
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-72 43
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 9e-69 43
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 3e-77 43
escN AAK26715.1 EscN Virulence LEE Protein 2e-72 43
escN AAL57542.1 EscN Virulence LEE Protein 2e-72 43
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-72 43
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 4e-74 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 3e-72 42
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 3e-73 41
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-73 41
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 1e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_001177252.1 flagellum-specific ATP synthase VFG2331 Protein 4e-180 85
fliI YP_001177252.1 flagellum-specific ATP synthase VFG2499 Protein 2e-145 68
fliI YP_001177252.1 flagellum-specific ATP synthase VFG1254 Protein 2e-120 61
fliI YP_001177252.1 flagellum-specific ATP synthase VFG0515 Protein 1e-69 47
fliI YP_001177252.1 flagellum-specific ATP synthase VFG2144 Protein 1e-85 45
fliI YP_001177252.1 flagellum-specific ATP synthase VFG0048 Protein 1e-82 45
fliI YP_001177252.1 flagellum-specific ATP synthase VFG0812 Protein 1e-73 45
fliI YP_001177252.1 flagellum-specific ATP synthase VFG0730 Protein 2e-73 45
fliI YP_001177252.1 flagellum-specific ATP synthase VFG0390 Protein 4e-76 44
fliI YP_001177252.1 flagellum-specific ATP synthase VFG0192 Protein 4e-78 44
fliI YP_001177252.1 flagellum-specific ATP synthase VFG2459 Protein 7e-66 41
fliI YP_001177252.1 flagellum-specific ATP synthase VFG1008 Protein 1e-65 41